CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033747_P001	Maize	cytosol, extracellular	96.73	96.21
TraesCS4B01G047400.1	Wheat	cytosol, golgi	86.38	87.57
Os03t0712800-02	Rice	cytosol, plastid	87.74	87.03
TraesCS4D01G047400.1	Wheat	cytosol	85.83	87.02
HORVU4Hr1G007610.1	Barley	cytosol	85.56	86.74
VIT_14s0006g00350.t01	Wine grape	cytosol	83.65	86.24
GSMUA_Achr8P30880_001	Banana	cytosol	83.65	85.99
TraesCS4A01G266900.1	Wheat	cytosol	84.74	85.91
GSMUA_Achr1P22290_001	Banana	cytosol	83.11	85.43
KXG30808	Sorghum	cytosol	82.83	85.39
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	82.29	84.83
KRH30929	Soybean	endoplasmic reticulum	81.74	84.27
KRH17323	Soybean	cytosol	81.47	83.99
OQU92979	Sorghum	cytosol	81.47	83.75
KRH72976	Soybean	cytosol	81.2	83.71
KRH72975	Soybean	cytosol	50.68	73.52
KXG27313	Sorghum	plastid	74.39	63.05
KRH17322	Soybean	cytosol	43.05	62.7

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	UniProt:A0A1Z5S5L4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0005488	GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom
InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	EnsemblPlants:OQU91109	ProteinID:OQU91109
ProteinID:OQU91109.1	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF58	SMART:SM01230	EnsemblPlantsGene:SORBI_3001G116400	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000B8BB034
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:9072758..9076023

Molecular Weight (calculated)

40079.2 Da

IEP (calculated)

5.893

GRAVY (calculated)

-0.434

Length

367 amino acids

Sequence
(BLAST)

001: MALLSDLINL DLSDCTEKII AEYIWVGGSG MDVRSKARTL SGPVDDPSKL PKWNFDGSST GQAPGDDSEV ILCPRAIFRD PFRKGKNILV MCDCYEPNGK
101: PIPSNKRHGA ATIFSHPDVK AEEPWFGIEQ EYTLLQKDTN WPLGWPLGGY PGPQGPYYCA AGADKSYGRE IVDAHYKACL YAGIDISGIN GEVMPGQWEF
201: QVGPAVGVSA GDQLWVARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMRSD GGYEVIKKAI SKLGLRHREH IAAYGDGNER RLTGRHETAD
301: INTFIWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSLIAET TILWEPSHSN GKGAAAP

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.