Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49656 | Canola | cytosol | 96.63 | 96.63 |
| Bra008612.1-P | Field mustard | cytosol | 96.35 | 96.35 |
| CDX69442 | Canola | cytosol | 96.07 | 96.07 |
| CDY38104 | Canola | cytosol | 95.51 | 95.51 |
| Bra023573.1-P | Field mustard | cytosol | 95.22 | 95.22 |
| CDX85499 | Canola | cytosol | 95.22 | 95.22 |
| AT5G37600.1 | Thale cress | cytosol | 88.48 | 88.48 |
| PGSC0003DMT400034421 | Potato | cytosol | 86.8 | 87.29 |
| Solyc11g011380.1.1 | Tomato | extracellular | 86.24 | 86.72 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 86.24 | 86.24 |
| Solyc05g051250.2.1 | Tomato | unclear | 85.39 | 85.39 |
| KRH48674 | Soybean | endoplasmic reticulum | 85.11 | 85.11 |
| PGSC0003DMT400037822 | Potato | cytosol | 85.11 | 85.11 |
| KRH39031 | Soybean | cytosol, nucleus | 84.83 | 84.83 |
| AT1G66200.3 | Thale cress | cytosol | 86.52 | 84.38 |
| AT3G17820.1 | Thale cress | cytosol | 82.87 | 83.33 |
| AT1G48470.1 | Thale cress | cytosol | 79.21 | 79.89 |
| AT5G35630.1 | Thale cress | plastid | 77.53 | 64.19 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | EntrezGene:831519 | UniProt:A0A178UB24 | ProteinID:AED92312.1 | ArrayExpress:AT5G16570 | EnsemblPlantsGene:AT5G16570 |
| RefSeq:AT5G16570 | TAIR:AT5G16570 | RefSeq:AT5G16570-TAIR-G | EnsemblPlants:AT5G16570.1 | TAIR:AT5G16570.1 | EMBL:AY059932 |
| EMBL:AY128749 | ProteinID:BAB10184.1 | Symbol:GLN1;4 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004356 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006542 | GO:GO:0006807 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009399 | GO:GO:0009987 | GO:GO:0016874 | GO:GO:0042128 |
| InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp | InterPro:Gln_synth/guanido_kin_cat_dom | InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site |
| InterPro:IPR036651 | RefSeq:NP_568335.1 | ProteinID:OAO90312.1 | PFAM:PF00120 | PFAM:PF03951 | PO:PO:0000013 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020038 |
| PO:PO:0025022 | ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF78 | UniProt:Q9FMD9 |
| SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 | UniParc:UPI00000A5FE1 | SEG:seg | : |
Description
GLN1-4Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178UB24]
Coordinates
chr5:-:5421591..5424749
Molecular Weight (calculated)
38988.9 Da
IEP (calculated)
4.908
GRAVY (calculated)
-0.406
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLADLINL DLSDSTDQII AEYIWIGGSG LDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGDDSEV IIYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.