Factsheet for VIT_13s0175g00190.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
plasma membrane 6
extracellular 6
endoplasmic reticulum 4
vacuole 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22660_001	Banana	cytosol	58.73	4.57
VIT_06s0004g03450.t01	Wine grape	cytosol	58.73	4.52
EES03840	Sorghum	cytosol	57.14	4.4
TraesCS3A01G352800.1	Wheat	cytosol	53.97	4.16
TraesCS3B01G385500.1	Wheat	cytosol	52.38	4.04
TraesCS3D01G346900.1	Wheat	golgi, unclear	52.38	4.04
Os01t0834200-01	Rice	cytosol	50.79	3.91
VIT_18s0001g13410.t01	Wine grape	cytosol	49.21	3.84
VIT_03s0038g00290.t01	Wine grape	cytosol	47.62	3.65
VIT_13s0175g00200.t01	Wine grape	cytosol	3.17	1.04
KXG29301	Sorghum	cytosol	0.0	0.0
Zm00001d040680_P001	Maize	mitochondrion	0.0	0.0
Zm00001d046282_P001	Maize	cytosol	0.0	0.0

Protein Annotations

MapMan:35.2	ProteinID:CBI40899	ProteinID:CBI40899.3	UniProt:D7UDT4	EMBL:FN596766	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078
GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	PFAM:PF01496
PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	TMHMM:TMhelix	UniParc:UPI0001BE54B8	InterPro:V-ATPase_116kDa_su	ArrayExpress:VIT_13s0175g00190
EnsemblPlantsGene:VIT_13s0175g00190	EnsemblPlants:VIT_13s0175g00190.t01	unigene:Vvi.5362	:	:	:

Description

V-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:D7UDT4]

Coordinates

chr13:-:15206279..15209759

Molecular Weight (calculated)

6965.7 Da

IEP (calculated)

6.213

GRAVY (calculated)

1.027

Length

63 amino acids

Sequence
(BLAST)

1: MEVSIITLSS GWWGLAVFAF ATAFILLMME TLGAFLHALR LHWVEFQSVT MVATNSGLSP LLH

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.