CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83291	Canola	cytosol	58.14	13.74
EES03840	Sorghum	cytosol	90.7	4.77
Zm00001d012446_P002	Maize	cytosol	88.37	4.65
Os01t0834200-01	Rice	cytosol	81.4	4.28
TraesCS3B01G385500.1	Wheat	cytosol	79.07	4.16
TraesCS3A01G352800.1	Wheat	cytosol	79.07	4.16
TraesCS3D01G346900.1	Wheat	golgi, unclear	76.74	4.04
Solyc11g072530.1.1	Tomato	cytosol	62.79	3.3
PGSC0003DMT400065278	Potato	cytosol	62.79	3.3
KRH22944	Soybean	cytosol	62.79	3.29
KRG89062	Soybean	cytosol, endoplasmic reticulum	60.47	3.18
Solyc06g075400.2.1	Tomato	cytosol	60.47	3.18
PGSC0003DMT400019381	Potato	cytosol	60.47	3.18
KRH24948	Soybean	cytosol	60.47	3.18
KRH10401	Soybean	cytosol, endoplasmic reticulum	60.47	3.16
CDY04571	Canola	cytosol	58.14	3.15
CDX77187	Canola	cytosol	58.14	3.15
CDY53381	Canola	cytosol	58.14	3.13
CDY15756	Canola	cytosol	58.14	3.13
Bra035693.1-P	Field mustard	cytosol	58.14	3.05
Bra011941.1-P	Field mustard	cytosol	58.14	3.05
CDX83292	Canola	cytosol	58.14	3.04
CDY63878	Canola	cytosol, plasma membrane, plastid	58.14	2.94
AT2G28520.1	Thale cress	cytosol	55.81	2.94
EER95168	Sorghum	cytosol	51.16	2.68
Bra000490.1-P	Field mustard	cytosol	58.14	2.62
GSMUA_Achr7P22660_001	Banana	cytosol	46.51	2.47
VIT_13s0175g00190.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:KXG29301	EnsemblPlantsGene:SORBI_3004G013900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0033179	InterPro:V-ATPase_116kDa_su
PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	ProteinID:KXG29301	ProteinID:KXG29301.1	ProteinID:KXG29302.1	UniParc:UPI0007F2B73E
UniProt:A0A194YM85	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:1129849..1132762

Molecular Weight (calculated)

4807.1 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.523

Length

43 amino acids

Sequence
(BLAST)

1: MGVFDQLPPM DHMVSEKMCF VHLIMPAKSS RLAVTYLGEL GLL

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.