Factsheet for Zm00001d012446_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046282_P001	Maize	cytosol	16.75	94.48
Zm00001d040680_P001	Maize	mitochondrion	12.71	91.23
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	26.04	90.64
Os01t0834200-01	Rice	cytosol	89.98	89.98
TraesCS3D01G346900.1	Wheat	golgi, unclear	88.63	88.74
TraesCS3B01G385500.1	Wheat	cytosol	88.51	88.62
TraesCS3A01G352800.1	Wheat	cytosol	88.51	88.62
KXG29301	Sorghum	cytosol	4.65	88.37
GSMUA_Achr7P22660_001	Banana	cytosol	77.38	78.24
Solyc06g075400.2.1	Tomato	cytosol	74.94	74.94
Solyc11g072530.1.1	Tomato	cytosol	74.94	74.85
PGSC0003DMT400019381	Potato	cytosol	74.69	74.69
KRH24948	Soybean	cytosol	74.57	74.57
PGSC0003DMT400065278	Potato	cytosol	74.57	74.48
KRH22944	Soybean	cytosol	74.57	74.39
KRH10401	Soybean	cytosol, endoplasmic reticulum	74.08	73.72
KRG89062	Soybean	cytosol, endoplasmic reticulum	73.47	73.47
AT2G28520.1	Thale cress	cytosol	72.13	72.22
CDY04571	Canola	cytosol	69.93	72.04
CDY15756	Canola	cytosol	70.17	71.84
CDX83292	Canola	cytosol	72.25	71.81
CDX77187	Canola	cytosol	69.56	71.66
CDY53381	Canola	cytosol	69.68	71.34
Bra011941.1-P	Field mustard	cytosol	70.42	70.16
CDY63878	Canola	cytosol, plasma membrane, plastid	72.37	69.65
Bra035693.1-P	Field mustard	cytosol	69.68	69.51
Zm00001d047910_P001	Maize	plasma membrane	62.59	62.44
Zm00001d028436_P001	Maize	mitochondrion, plastid	61.86	61.56
CDX83291	Canola	cytosol	13.45	60.44
Bra000490.1-P	Field mustard	cytosol	69.93	59.9

Protein Annotations

EntrezGene:103636525	MapMan:24.1.1.1.1	UniProt:A0A1D6G8S1	ProteinID:AQK99557.1	ncoils:Coil	GO:GO:0000220
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	PFAM:PF01496	PIRSF:PIRSF001293
PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	TMHMM:TMhelix	UniParc:UPI0004DE8AEA	InterPro:V-ATPase_116kDa_su	InterPro:V-type_ATPase_116kDa_su_euka
EnsemblPlantsGene:Zm00001d012446	EnsemblPlants:Zm00001d012446_P002	EnsemblPlants:Zm00001d012446_T002	SEG:seg	:	:

Description

V-type proton ATPase subunit a1

Coordinates

chr8:-:174687822..174699554

Molecular Weight (calculated)

93222.1 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.038

Length

818 amino acids

Sequence
(BLAST)

001: MGLFDRLPPM DHMRSEKMCF VQLIMPAESS RLAVTYLGEL GLLQFKDLNE DKSPFQRIFV NQVKRCAEMS RKLKFFSDQI NRAGLRSSVR PALEPDIDLE
101: ELEARLGEHE HELLEMNTNS DKLKQTYNEL LEFKLVLSKA GHILASSHSH AASAEHELDE NIYDNGIHEG NAYLLEQGVH QGAHGHSGVR FVSGIILKSK
201: ALAFERMLFR ATRGNMLFNQ ASAGEPVTDP ISGEEVEKAV FVVFFSGEQA KAKILKICDS FGASCYPVPE EMVKQRQIFN EVSARLSDLE VTLDAGIQHR
301: NKALESIGSQ LWRWTIMVKK EKAVYDTLNM LNFDVTKKCL VGEGWCPIFA KSQIKDCLQR STIHSNSQVG TIFHEMDTIE SPPTYFRTDK FTNAFQEIVD
401: AYGVARYQEA NPAVYSVVTF PFLFAVMFGD WGHGICLLLG ALVLILREKR FSSQKLGSFM ELAFGGRYVI LLMAIFSIYC GLIYNEFFSV PFHIFGKSAY
501: ECRDKSCSDA HTFGLIKVRE PYPFGVDPSW RGSRSELPFL NSLKMKMSIL MGVAQMNLGI VLSYFDARYH GNALDIRYQF IPQMIFLNSL FGYLALLILI
601: KWCTGSQADL YHVMIYMFLD PAGDLGENQL FWGQKELQIL LLLLALIAVP WMLFPKPFIL KKLHKERFQG HTYRFLGTSE MDPDSEPDSA RARHDDFNFS
701: EVFVHQMIHS IEFVLGAVSN TASYLRLWAL SLAHSELSTV FYEKLLLLAW GYDSLIVKFV GLIVFSFATA FILLMMETLS AFLHALRLHW VEFMNKFYHG
801: DGYKFKPFSF ALLADDED

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.