Factsheet for Bra011941.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04571	Canola	cytosol	93.67	96.85
Bra035693.1-P	Field mustard	cytosol	96.1	96.22
AT2G28520.1	Thale cress	cytosol	91.72	92.17
VIT_06s0004g03450.t01	Wine grape	cytosol	79.9	80.2
KRH22944	Soybean	cytosol	78.56	78.66
KRH10401	Soybean	cytosol, endoplasmic reticulum	78.44	78.35
Solyc06g075400.2.1	Tomato	cytosol	77.71	78.0
PGSC0003DMT400019381	Potato	cytosol	77.59	77.87
Bra000490.1-P	Field mustard	cytosol	90.5	77.8
PGSC0003DMT400065278	Potato	cytosol	77.59	77.78
KRH24948	Soybean	cytosol	77.47	77.75
KRG89062	Soybean	cytosol, endoplasmic reticulum	77.47	77.75
Solyc11g072530.1.1	Tomato	cytosol	77.22	77.41
GSMUA_Achr7P22660_001	Banana	cytosol	73.2	74.29
EES03840	Sorghum	cytosol	70.89	71.15
Zm00001d012446_P002	Maize	cytosol	70.16	70.42
TraesCS3B01G385500.1	Wheat	cytosol	69.67	70.01
TraesCS3D01G346900.1	Wheat	golgi, unclear	69.55	69.89
Os01t0834200-01	Rice	cytosol	69.55	69.8
TraesCS3A01G352800.1	Wheat	cytosol	69.18	69.52
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	19.12	66.81
VIT_13s0175g00200.t01	Wine grape	cytosol	14.37	61.46
Bra010712.1-P	Field mustard	cytosol	60.78	60.93
Bra030300.1-P	Field mustard	cytosol	59.93	60.15
Bra011878.1-P	Field mustard	cytosol	54.69	60.03
Bra031187.1-P	Field mustard	cytosol	59.56	59.56
KXG29301	Sorghum	cytosol	3.05	58.14
Zm00001d046282_P001	Maize	cytosol	10.11	57.24
Zm00001d040680_P001	Maize	mitochondrion	7.67	55.26

Protein Annotations

MapMan:24.1.1.1.1	EnsemblPlantsGene:Bra011941	EnsemblPlants:Bra011941.1	EnsemblPlants:Bra011941.1-P	ncoils:Coil	GO:GO:0000220
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	UniProt:M4D633	PFAM:PF01496
PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	TMHMM:TMhelix	UniParc:UPI00025412DC	InterPro:V-ATPase_116kDa_su
InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:	:	:	:

Description

AT2G28520 (E=0.0) VHA-A1 | VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase

Coordinates

chrA07:+:11111598..11117848

Molecular Weight (calculated)

94116.6 Da

IEP (calculated)

6.080

GRAVY (calculated)

-0.036

Length

821 amino acids

Sequence
(BLAST)

001: MDDFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRCVTYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RHELEPDIEL
101: GDLERQLAEH EHEVLEMNSN SEKLRQTYNE LLEFKIVLQK ANGFLVSSNA HATGDETELH EGTYSNNGFI ETSSLLEQEM RPEPLNQSGL RFISGIINKD
201: KLLRFERMLF RATRGNMLFN QTPSDEEIMD PSTSEMVEKI VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNDALNAVGY SLTKWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSNSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSSQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLVKYR DPYPFGVDPS WRGSRSELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQA QFCYCLWHSS LSHGCFFLNP LLSGKFTWRF QGRTYGVLGT SEVDLDVEPG SARGHQEEEF
701: NFSEIFVHQL IHSLEFVLGS VSNTESYLRL WALSLAHSEL STVFYEKVLL LAWGYENILI RLIGLVVFAF ATAFILLMME TLSAFLHALR LHWVEFMGKF
801: FHGDGYKFKP FSFALISNDD E

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.