CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10401	Soybean	cytosol, endoplasmic reticulum	96.71	96.47
KRH24948	Soybean	cytosol	88.17	88.39
KRG89062	Soybean	cytosol, endoplasmic reticulum	87.56	87.78
VIT_06s0004g03450.t01	Wine grape	cytosol	86.83	87.04
Solyc11g072530.1.1	Tomato	cytosol	83.29	83.39
PGSC0003DMT400065278	Potato	cytosol	83.17	83.27
Solyc06g075400.2.1	Tomato	cytosol	81.46	81.66
PGSC0003DMT400019381	Potato	cytosol	81.22	81.42
AT2G28520.1	Thale cress	cytosol	80.37	80.66
CDY15756	Canola	cytosol	78.41	80.48
CDY04571	Canola	cytosol	77.68	80.23
CDX83292	Canola	cytosol	80.12	79.83
CDY53381	Canola	cytosol	77.56	79.6
CDX77187	Canola	cytosol	76.95	79.47
Bra011941.1-P	Field mustard	cytosol	78.66	78.56
Bra035693.1-P	Field mustard	cytosol	77.93	77.93
GSMUA_Achr7P22660_001	Banana	cytosol	76.46	77.5
CDY63878	Canola	cytosol, plasma membrane, plastid	80.12	77.29
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	21.95	76.6
EES03840	Sorghum	cytosol	75.12	75.31
Os01t0834200-01	Rice	cytosol	74.63	74.82
Zm00001d012446_P002	Maize	cytosol	74.39	74.57
TraesCS3B01G385500.1	Wheat	cytosol	73.05	73.32
TraesCS3D01G346900.1	Wheat	golgi, unclear	72.93	73.19
CDX83291	Canola	cytosol	16.22	73.08
TraesCS3A01G352800.1	Wheat	cytosol	72.44	72.7
Bra000490.1-P	Field mustard	cytosol	77.56	66.6
VIT_13s0175g00200.t01	Wine grape	cytosol	15.24	65.1
KRG89695	Soybean	extracellular, mitochondrion	5.12	64.62
KRH29384	Soybean	endoplasmic reticulum	64.02	64.18
KRH24405	Soybean	endoplasmic reticulum	64.02	64.18
KRH51766	Soybean	endoplasmic reticulum	62.93	63.31
KXG29301	Sorghum	cytosol	3.29	62.79
KRH61086	Soybean	cytosol, mitochondrion	49.51	59.62
Zm00001d046282_P001	Maize	cytosol	10.24	57.93
Zm00001d040680_P001	Maize	mitochondrion	8.05	57.89

Protein Annotations

EntrezGene:100776037	MapMan:24.1.1.1.1	EMBL:ACUP02008447	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G329100	GO:GO:0000220
GO:GO:0000325	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006139
GO:GO:0006810	GO:GO:0006811	GO:GO:0007035	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016471	GO:GO:0016787	GO:GO:0019725	GO:GO:0033179
GO:GO:0046961	GO:GO:0051117	GO:GO:0070072	UniProt:I1M4P0	EnsemblPlants:KRH22944	ProteinID:KRH22944
ProteinID:KRH22944.1	ProteinID:KRH22945.1	PFAM:PF01496	PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF72
TMHMM:TMhelix	UniParc:UPI00023CF07A	InterPro:V-ATPase_116kDa_su	InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:42366389..42382142

Molecular Weight (calculated)

94144.2 Da

IEP (calculated)

6.547

GRAVY (calculated)

0.020

Length

820 amino acids

Sequence
(BLAST)

001: MEQFIDNLPP MDLMRSEKMT FVQLIIPAES AHRAISYLGE LGLLQFRDLN ADKSPFQRTF VNQVKRCGEM SRKLRFFKDQ ISKAGLMSSS RTELQPDIDL
101: EDLEIQLAEH EHELIEMNSN SDKLRQSYNE LLEFKIVLQK ACGFLVSNHS RVVLDERELR ENVYSNDAYV ETVSLLEQEM RPQSSNSSGL RFISGIICKS
201: KVLRFERMLF RATRGNMLFN LAPADEQIMD PVSADMIEKT VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDISKQRQIT REVSSRLTDL EATLEAGIRH
301: RNKALASVAD HLAKWMNMVR REKAVYDTLN MLNFDVTKKC LVGEGWCPLF AKTQMQEALQ RATFDSNSQV GIILHPMDAV ESPPTYFRTN TFTNPYQEIV
401: DAYGVARYQE ANPAVYTTVI FPFLFALMFG DWGHGICLLL GALVLIAREN KLSTQKLGSF MEMLFGGRYV LLLMALFSIY CGLIYNEFFS VPFHIFGASA
501: YKCRDSSCRD AHTIGLIKYQ DPYPFGVDPS WRGSRSELPF LNSLKMKMSI LFGVAHMNLG IVLSYFNAHF FRNSLDIRYQ FVPQMIFLNS LFGYLSLLIV
601: IKWCTGSQAD LYHVMIYMFL SPTDNLGENQ LFWGQRPLQI VLLLLAVIAV PWMLFPKPFI LKKLHTERFQ GRSYGILNTS EVDLEAEPDS ARQHHHEEFN
701: FSEVFVHQMI HAIEFVLGSV SNTASYLRLW ALSLAHSELS TVFYEKVLLL AWGYDNLVIR LVGLTVFAFA TAFILLMMES LSAFLHALRL HWVEFQNKFY
801: HGDGYKFRPF SFASLTEDDD

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.