CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29301	Sorghum	cytosol	13.74	58.14
CDX80454	Canola	extracellular	15.93	40.85
CDX89488	Canola	cytosol	18.68	25.37
Zm00001d046282_P001	Maize	cytosol	19.23	24.14
CDX83292	Canola	cytosol	98.35	21.75
CDX77187	Canola	cytosol	94.51	21.66
CDY53381	Canola	cytosol	95.05	21.65
CDY04571	Canola	cytosol	92.86	21.28
CDY15756	Canola	cytosol	93.41	21.28
CDY63878	Canola	cytosol, plasma membrane, plastid	98.35	21.06
AT2G28520.1	Thale cress	cytosol	89.56	19.95
Bra000490.1-P	Field mustard	cytosol	97.8	18.64
Zm00001d040680_P001	Maize	mitochondrion	10.99	17.54
VIT_06s0004g03450.t01	Wine grape	cytosol	73.63	16.38
KRH22944	Soybean	cytosol	73.08	16.22
KRH10401	Soybean	cytosol, endoplasmic reticulum	71.98	15.94
KRG89062	Soybean	cytosol, endoplasmic reticulum	69.23	15.4
PGSC0003DMT400065278	Potato	cytosol	69.23	15.38
Solyc11g072530.1.1	Tomato	cytosol	68.68	15.26
KRH24948	Soybean	cytosol	68.13	15.16
PGSC0003DMT400019381	Potato	cytosol	65.93	14.67
Solyc06g075400.2.1	Tomato	cytosol	65.38	14.55
GSMUA_Achr7P22660_001	Banana	cytosol	62.09	13.97
EES03840	Sorghum	cytosol	60.44	13.45
Zm00001d012446_P002	Maize	cytosol	60.44	13.45
Os01t0834200-01	Rice	cytosol	59.34	13.2
TraesCS3A01G352800.1	Wheat	cytosol	57.69	12.85
TraesCS3B01G385500.1	Wheat	cytosol	57.69	12.85
TraesCS3D01G346900.1	Wheat	golgi, unclear	57.69	12.85
CDX90307	Canola	cytosol	48.35	10.74
CDY12118	Canola	cytosol	48.35	10.73
CDY41958	Canola	cytosol	47.8	10.65
CDY13818	Canola	cytosol, nucleus, plastid	46.7	10.64
CDY42603	Canola	cytosol	47.8	10.64
CDY15895	Canola	cytosol	47.8	10.62
CDX82029	Canola	cytosol	47.8	10.6
CDX99594	Canola	cytosol	47.8	10.57
CDX96169	Canola	cytosol, plasma membrane, plastid	4.4	3.49
CDY61341	Canola	cytosol	4.4	2.8
CDY71986	Canola	cytosol	3.3	2.69
VIT_13s0175g00200.t01	Wine grape	cytosol	0.55	0.52
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDX83291	EnsemblPlantsGene:GSBRNA2T00138846001	GO:A0A078D1P9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0033179
InterPro:V-ATPase_116kDa_su	ncoils:Coil	PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	PFAM:PF01496	ProteinID:CDX83291
ProteinID:CDX83291.1	UniParc:UPI0004EE1226	MapMan:35.1	:	:	:

Description

BnaA03g22150D

Coordinates

chrLK031832:+:877789..879472

Molecular Weight (calculated)

20919.0 Da

IEP (calculated)

4.968

GRAVY (calculated)

-0.446

Length

182 amino acids

Sequence
(BLAST)

001: MDDFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSVTYLGE LGLLQFRDLN ADKSPFQRTF ATQVKRCGEM SRKLRFFKDQ IDKAGLRCLQ RHELEPNIEL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLQK ASGFLVSSNA HAIGDETELH ESTYSNNGFI ESSSLLEQVV AC

Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)

001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E

Arabidopsis Description

VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.