Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010712.1-P | Field mustard | cytosol | 98.9 | 99.02 |
| CDX90307 | Canola | cytosol | 98.9 | 99.02 |
| CDY41958 | Canola | cytosol | 95.24 | 95.59 |
| CDY42603 | Canola | cytosol | 94.27 | 94.5 |
| AT4G39080.1 | Thale cress | cytosol, nucleus, plasma membrane | 93.78 | 93.67 |
| CDX82029 | Canola | cytosol | 88.17 | 88.06 |
| CDX99594 | Canola | cytosol | 88.29 | 87.97 |
| CDY15895 | Canola | cytosol | 87.8 | 87.91 |
| KRH24405 | Soybean | endoplasmic reticulum | 78.66 | 78.85 |
| KRH29384 | Soybean | endoplasmic reticulum | 78.54 | 78.73 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 78.78 | 78.59 |
| CDY61341 | Canola | cytosol | 27.07 | 77.62 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 75.61 | 77.6 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 77.44 | 77.44 |
| CDX80454 | Canola | extracellular | 6.59 | 76.06 |
| CDY71986 | Canola | cytosol | 19.88 | 73.09 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 19.51 | 69.87 |
| KRG89695 | Soybean | extracellular, mitochondrion | 5.49 | 69.23 |
| CDY15756 | Canola | cytosol | 60.73 | 62.33 |
| CDY53381 | Canola | cytosol | 60.61 | 62.2 |
| CDX83292 | Canola | cytosol | 61.95 | 61.73 |
| CDY04571 | Canola | cytosol | 59.76 | 61.71 |
| CDX77187 | Canola | cytosol | 59.39 | 61.34 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 61.71 | 59.53 |
| CDX89488 | Canola | cytosol | 8.29 | 50.75 |
| CDX83291 | Canola | cytosol | 10.73 | 48.35 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078FJ17 | UniProt:A0A078FJ17 | EnsemblPlants:CDY12118 | ProteinID:CDY12118 | ProteinID:CDY12118.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00061106001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix |
| UniParc:UPI0004EEF7D2 | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaC03g60340DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078FJ17]
Coordinates
chrLK032017:+:682158..687483
Molecular Weight (calculated)
92851.9 Da
IEP (calculated)
6.162
GRAVY (calculated)
0.041
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENGGGGGC CPPMDLMRSE PMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF KDQMSKAGVL PKEMLGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LEKAGEFFSS AHRSATAQQR ETESPRASED LLESPLLQEE KSIDASKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNVYV RQTVVEETVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLRKQAQM ITEVSGRLTE LKTTIDAGLG
301: HRNILLQTIG DKFELWSLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASKEIQKAL ERAAVDSNSQ VGSIFQILRT KELPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICLL LATMYLIVRE KKLASQKLGD IMEMAFGGRY VIMMMSLFSI YTGLIYNEFF SIPYPLFAPS
501: AYDCRDASCS EATTIGLIKV RDTYPFGLDP VWHGTRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNVWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPTDELGEN QLFPHQKTVQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQSYAPLEE TDESLHVETS GGSHGHEEFE
701: FSEIFVHQLI HTIEFVLGAV SNTASYLRLW ALSLAHSELS SVFYEKVLLL AWGYNNWLIL IVGIIVFVFA TVGVLLVMET LSAFLHALRL HWVEFQNKFY
801: EGDGYKFAPF SFILTASEDE
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LEKAGEFFSS AHRSATAQQR ETESPRASED LLESPLLQEE KSIDASKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNVYV RQTVVEETVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLRKQAQM ITEVSGRLTE LKTTIDAGLG
301: HRNILLQTIG DKFELWSLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASKEIQKAL ERAAVDSNSQ VGSIFQILRT KELPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICLL LATMYLIVRE KKLASQKLGD IMEMAFGGRY VIMMMSLFSI YTGLIYNEFF SIPYPLFAPS
501: AYDCRDASCS EATTIGLIKV RDTYPFGLDP VWHGTRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNVWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPTDELGEN QLFPHQKTVQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQSYAPLEE TDESLHVETS GGSHGHEEFE
701: FSEIFVHQLI HTIEFVLGAV SNTASYLRLW ALSLAHSELS SVFYEKVLLL AWGYNNWLIL IVGIIVFVFA TVGVLLVMET LSAFLHALRL HWVEFQNKFY
801: EGDGYKFAPF SFILTASEDE
001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
Arabidopsis Description
VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.