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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89488 Canola cytosol 73.24 38.81
CDX83291 Canola cytosol 40.85 15.93
CDY13818 Canola cytosol, nucleus, plastid 74.65 6.63
CDY12118 Canola cytosol 76.06 6.59
CDX99594 Canola cytosol 71.83 6.2
CDX90307 Canola cytosol 70.42 6.11
CDY15895 Canola cytosol 70.42 6.11
CDX82029 Canola cytosol 70.42 6.09
CDY41958 Canola cytosol 67.61 5.88
CDY42603 Canola cytosol 67.61 5.87
Zm00001d047910_P001 Maize plasma membrane 66.2 5.73
EER95168 Sorghum cytosol 64.79 5.6
Zm00001d028436_P001 Maize mitochondrion, plastid 64.79 5.6
Os03t0251500-01 Rice plasma membrane 61.97 5.37
TraesCS4A01G081100.1 Wheat cytosol 61.97 5.36
TraesCS4D01G223300.2 Wheat cytosol 61.97 5.36
TraesCS4B01G222700.3 Wheat cytosol 61.97 5.32
HORVU4Hr1G062880.3 Barley plasma membrane, vacuole 61.97 4.75
GSMUA_Achr5P18710_001 Banana cytosol, extracellular 53.52 4.7
CDY15756 Canola cytosol 47.89 4.26
CDX83292 Canola cytosol 49.3 4.25
CDY63878 Canola cytosol, plasma membrane, plastid 49.3 4.12
CDY53381 Canola cytosol 45.07 4.01
CDX77187 Canola cytosol 42.25 3.78
CDY04571 Canola cytosol 42.25 3.78
CDY61341 Canola cytosol 4.23 1.05
CDX96169 Canola cytosol, plasma membrane, plastid 2.82 0.87
CDY71986 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDX80454EnsemblPlantsGene:GSBRNA2T00133537001GO:A0A078CWP7GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015078GO:GO:0015991GO:GO:0016020GO:GO:0033179
InterPro:V-ATPase_116kDa_suPANTHER:PTHR11629PANTHER:PTHR11629:SF89ProteinID:CDX80454ProteinID:CDX80454.1UniParc:UPI0004EEF4A8
MapMan:35.1:::::
Description
BnaC07g29900D
Coordinates
chrLK031821:+:566792..567007
Molecular Weight (calculated)
7695.7 Da
IEP (calculated)
5.519
GRAVY (calculated)
0.521
Length
71 amino acids
Sequence
(BLAST)
1: MAENRGGGGC CPPMDLMRSE PMQLVQVIVP MESAHLTVSY LGDLGLVQFK DVHILSLFLS PVQLRSLIIA A
Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)
001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
Arabidopsis Description
VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.