Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX89488 | Canola | cytosol | 73.24 | 38.81 |
CDX83291 | Canola | cytosol | 40.85 | 15.93 |
CDY13818 | Canola | cytosol, nucleus, plastid | 74.65 | 6.63 |
CDY12118 | Canola | cytosol | 76.06 | 6.59 |
CDX99594 | Canola | cytosol | 71.83 | 6.2 |
CDX90307 | Canola | cytosol | 70.42 | 6.11 |
CDY15895 | Canola | cytosol | 70.42 | 6.11 |
CDX82029 | Canola | cytosol | 70.42 | 6.09 |
CDY41958 | Canola | cytosol | 67.61 | 5.88 |
CDY42603 | Canola | cytosol | 67.61 | 5.87 |
Zm00001d047910_P001 | Maize | plasma membrane | 66.2 | 5.73 |
EER95168 | Sorghum | cytosol | 64.79 | 5.6 |
Zm00001d028436_P001 | Maize | mitochondrion, plastid | 64.79 | 5.6 |
Os03t0251500-01 | Rice | plasma membrane | 61.97 | 5.37 |
TraesCS4A01G081100.1 | Wheat | cytosol | 61.97 | 5.36 |
TraesCS4D01G223300.2 | Wheat | cytosol | 61.97 | 5.36 |
TraesCS4B01G222700.3 | Wheat | cytosol | 61.97 | 5.32 |
HORVU4Hr1G062880.3 | Barley | plasma membrane, vacuole | 61.97 | 4.75 |
GSMUA_Achr5P18710_001 | Banana | cytosol, extracellular | 53.52 | 4.7 |
CDY15756 | Canola | cytosol | 47.89 | 4.26 |
CDX83292 | Canola | cytosol | 49.3 | 4.25 |
CDY63878 | Canola | cytosol, plasma membrane, plastid | 49.3 | 4.12 |
CDY53381 | Canola | cytosol | 45.07 | 4.01 |
CDX77187 | Canola | cytosol | 42.25 | 3.78 |
CDY04571 | Canola | cytosol | 42.25 | 3.78 |
CDY61341 | Canola | cytosol | 4.23 | 1.05 |
CDX96169 | Canola | cytosol, plasma membrane, plastid | 2.82 | 0.87 |
CDY71986 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:CDX80454 | EnsemblPlantsGene:GSBRNA2T00133537001 | GO:A0A078CWP7 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0033179 |
InterPro:V-ATPase_116kDa_su | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | ProteinID:CDX80454 | ProteinID:CDX80454.1 | UniParc:UPI0004EEF4A8 |
MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g29900D
Coordinates
chrLK031821:+:566792..567007
Molecular Weight (calculated)
7695.7 Da
IEP (calculated)
5.519
GRAVY (calculated)
0.521
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MAENRGGGGC CPPMDLMRSE PMQLVQVIVP MESAHLTVSY LGDLGLVQFK DVHILSLFLS PVQLRSLIIA A
001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
Arabidopsis Description
VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.