Factsheet for Zm00001d047910_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95168	Sorghum	cytosol	95.85	95.62
Zm00001d028436_P001	Maize	mitochondrion, plastid	94.76	94.53
Os03t0251500-01	Rice	plasma membrane	87.2	87.2
TraesCS4D01G223300.2	Wheat	cytosol	86.46	86.36
TraesCS4A01G081100.1	Wheat	cytosol	86.22	86.11
TraesCS4B01G222700.3	Wheat	cytosol	86.59	85.85
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	79.88	81.06
VIT_03s0038g00290.t01	Wine grape	cytosol	77.68	77.49
AT4G39080.1	Thale cress	cytosol, nucleus, plasma membrane	76.95	76.86
Bra010712.1-P	Field mustard	cytosol	76.71	76.8
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	86.1	76.16
Bra011878.1-P	Field mustard	cytosol	69.27	75.94
VIT_18s0001g13410.t01	Wine grape	cytosol	74.63	75.74
KRH24405	Soybean	endoplasmic reticulum	75.49	75.67
Solyc01g110120.2.1	Tomato	nucleus, plastid	75.49	75.49
AT2G21410.1	Thale cress	cytosol	75.49	75.4
Bra031187.1-P	Field mustard	cytosol	75.49	75.4
KRH29384	Soybean	endoplasmic reticulum	75.0	75.18
PGSC0003DMT400071849	Potato	cytosol	74.76	74.94
Bra030300.1-P	Field mustard	cytosol	74.76	74.94
Solyc07g032080.2.1	Tomato	plastid	74.51	74.69
KRG89695	Soybean	extracellular, mitochondrion	5.85	73.85
KRH51766	Soybean	endoplasmic reticulum	72.8	73.25
KRH61086	Soybean	cytosol, mitochondrion	58.9	70.93
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	19.02	66.38
CDX80454	Canola	extracellular	5.73	66.2
Zm00001d012446_P002	Maize	cytosol	62.44	62.59
CDX89488	Canola	cytosol	7.32	44.78
Zm00001d046282_P001	Maize	cytosol	7.56	42.76
Zm00001d040680_P001	Maize	mitochondrion	5.12	36.84

Protein Annotations

MapMan:24.1.1.1.1	UniProt:A0A1D6PER2	ProteinID:AQL08022.1	ncoils:Coil	GO:GO:0000220	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	PFAM:PF01496	PIRSF:PIRSF001293	PANTHER:PTHR11629
PANTHER:PTHR11629:SF89	TMHMM:TMhelix	UniParc:UPI0008459D0D	InterPro:V-ATPase_116kDa_su	InterPro:V-type_ATPase_116kDa_su_euka	EnsemblPlantsGene:Zm00001d047910
EnsemblPlants:Zm00001d047910_P001	EnsemblPlants:Zm00001d047910_T001	SEG:seg	:	:	:

Description

V-type proton ATPase subunit a3

Coordinates

chr9:-:144997539..145004862

Molecular Weight (calculated)

92646.3 Da

IEP (calculated)

6.139

GRAVY (calculated)

0.036

Length

820 amino acids

Sequence
(BLAST)

001: MARGGGGGCC PPMDLMRSEA MQLVQVIIPA ESAHLTVSYL GDLGLLQFKD LNAEKSPFQR TYAAQIKRCS EMARKLRFFK EQMSKADIGP TQLNETHLDF
101: DDLEIKLGEL EAELTEVNAN NEKLLRTYNE LLEYHTVLQK AGDFFYSAQR TAASQQRELE ANQSGQTSLE SPLLEQEMST DPSKQVKLGS LSGLVPKEKA
201: MAFERILFRA TRGNIFLRQE PVDEPVTDPV SGEKVTKNAF VIFYSGERAK TKILKICDAF NANRYPFPED VSKQLHAVQE VSGKISELKA TIDMGLAHRD
301: SILKNIASDF EQWNHLVKKE KAIYHTLNML SVDVTKKCLV AEGWSPVFAS IQIQDALQRA TVNSKSQVGS IFEVLNTKES PPTYFQTNKF TSAFQEIVDA
401: YGVAKYQEAN PGVFTIVTFP FLFAVMFGDW GHGICLLLAT LYLIIREKKL ASQKLGDIME MMFGGRYVIM MMAVFSIYTG LIYNEFFSVP FGLFGKSAYA
501: CRDSSCSDAT TEGLIKVRDA YPFGVDPVWH GSRSELPFLN SLKMKMSILL GVAQMNLGIV ISYFNAKFFR NSLNVWYQFI PQLIFLNSLF GYLSLLIIIK
601: WCTGSKADLY HVMIYMFLSP TDEIGENQLF SGQKTVQLVL LLLALVSVPW MLIPKPLLLK KQHQQRHQGH QYAMLQGVDE SVGAELGEHH EEAHDHEEFE
701: FSEVFVHQLI HTIEFVLGAV SNTASYLRLW ALSLAHSELS TVFYDKVLLM AWGFNNVIIL IIGIIVFIFA TVGVLLVMET LSAFLHALRL HWVEFQNKFY
801: EGDGYKFAPF SFALIREEED

Best Arabidopsis Sequence Match ( AT4G39080.1 )
(BLAST)

001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E

Arabidopsis Description

VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.