Factsheet for PGSC0003DMT400071849

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g032080.2.1	Tomato	plastid	97.31	97.31
Os10t0184300-01	Rice	plasma membrane	10.64	82.86
VIT_18s0001g13410.t01	Wine grape	cytosol	79.46	80.45
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	77.02	77.97
KRH51766	Soybean	endoplasmic reticulum	76.89	77.18
EER95168	Sorghum	cytosol	75.18	74.82
Zm00001d047910_P001	Maize	plasma membrane	74.94	74.76
Zm00001d028436_P001	Maize	mitochondrion, plastid	74.94	74.57
Os03t0251500-01	Rice	plasma membrane	74.69	74.51
KRH61086	Soybean	cytosol, mitochondrion	61.98	74.45
TraesCS4D01G223300.2	Wheat	cytosol	73.72	73.45
TraesCS4A01G081100.1	Wheat	cytosol	73.59	73.33
TraesCS4B01G222700.3	Wheat	cytosol	73.96	73.16
HORVU2Hr1G109990.2	Barley	vacuole	71.15	71.06
TraesCS2D01G493000.1	Wheat	cytosol	70.78	70.7
TraesCS2A01G492800.1	Wheat	cytosol	70.54	70.45
TraesCS2B01G520900.1	Wheat	cytosol	70.54	70.45
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	72.86	64.29
PGSC0003DMT400065278	Potato	cytosol	64.06	63.98
PGSC0003DMT400019381	Potato	cytosol	62.59	62.59

Protein Annotations

EntrezGene:102606458	MapMan:24.1.1.1.1	ncoils:Coil	GO:GO:0000220	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0033179	UniProt:M1CPE5	PFAM:PF01496	EnsemblPlantsGene:PGSC0003DMG400027954	PGSC:PGSC0003DMG400027954
EnsemblPlants:PGSC0003DMT400071849	PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	TMHMM:TMhelix	UniParc:UPI000296DB43
InterPro:V-ATPase_116kDa_su	InterPro:V-type_ATPase_116kDa_su_euka	RefSeq:XP_006356756.1	SEG:seg	:	:

Description

Vacuolar proton atpase [Source:PGSC_GENE;Acc:PGSC0003DMG400027954]

Coordinates

chr7:-:18074248..18087322

Molecular Weight (calculated)

93350.1 Da

IEP (calculated)

6.090

GRAVY (calculated)

0.052

Length

818 amino acids

Sequence
(BLAST)

001: MVDGGGCCPT MDLLRSEPMQ LVQLIIPLES AHRTVSYLGD LGLFQFKDLN VEKSPFQRTY ATQIKRCGEM ARKLRFLKEQ MTKAGITPST RTTMCQNINL
101: DELEVKLGEL EADLAEMNTN TEKLQRSYNE LLEYKLVLQK AGEFFHSAQN SATAQQKELE EHMHSERSID SPLLLEQEAF ADPSKQVKLG FVSGLVAREK
201: SMAFERFLFR ATRGNVFLKQ VVVKNPVTDP LSGSEVEKNV FVIFYSGERT KNKILKICDA FGANRYPFTD DIGRQFEMIT EVSGKLSELK TTVDIGQLHR
301: ANLLQTIGYE FDQWNLLVKQ EKFIFHTLNM LSFDVTKKCL VGEGWCPVYA TSQIQNALHR ATLDGNSQVG AIFQVLHTTE LPPTYFRTNK FTSAFQEIVD
401: AYGIAKYQEV NPAVFTVVTF PFLFAVMFGD WGHGICLFLA TLYFILQERK LSGQKLGDIM EMTFGGRYII MMMALFSIYT GFIYNEFFSV PFEIFGQSAY
501: GCHDPSCRDA TITGLIKVRD AYPFGVDPKW HGSRSELPFL NSLKMKMSIL LGVAQMNLGI ILSYFNAKFF QNNVNVWHQF VPQIIFLNSL FGYLSLLIIV
601: KWCTGSQADL YHVMIYMFLS PTDDLGENQL FPGQKYLQLL FVSLALVAVP WMLFPKPFLL KKQHEERHRG QLYAMLESTD DSFELETHDH SHGHEEFDFS
701: EVFVHQLIHT IEFVLGAVSN TASYLRLWAL SLAHSELSSV FYDKVLLLAM GYNNLIILII GIVVFIFATV GVLLVMETLS AFLHALRLHW VEFQNKFYEG
801: DGYKFSPFSF CLISEDDD

Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)

001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E

Arabidopsis Description

VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.