Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| vacuole:
19142958
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G520900.1 | Wheat | cytosol | 96.09 | 96.09 |
| TraesCS2D01G493000.1 | Wheat | cytosol | 94.87 | 94.87 |
| TraesCS2A01G492800.1 | Wheat | cytosol | 94.26 | 94.26 |
| Os10t0184300-01 | Rice | plasma membrane | 10.74 | 83.81 |
| GSMUA_Achr5P18710_001 | Banana | cytosol, extracellular | 75.09 | 76.11 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 72.41 | 72.14 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 72.16 | 72.07 |
| AT4G39080.1 | Thale cress | cytosol, nucleus, plasma membrane | 71.67 | 71.5 |
| Bra010712.1-P | Field mustard | cytosol | 71.31 | 71.31 |
| PGSC0003DMT400071849 | Potato | cytosol | 71.06 | 71.15 |
| KRH24405 | Soybean | endoplasmic reticulum | 70.94 | 71.03 |
| Solyc07g032080.2.1 | Tomato | plastid | 70.82 | 70.9 |
| Bra011878.1-P | Field mustard | cytosol | 64.47 | 70.59 |
| VIT_18s0001g13410.t01 | Wine grape | cytosol | 69.6 | 70.54 |
| AT2G21410.1 | Thale cress | cytosol | 70.7 | 70.52 |
| KRH29384 | Soybean | endoplasmic reticulum | 70.33 | 70.42 |
| Bra030300.1-P | Field mustard | cytosol | 69.84 | 69.93 |
| Bra031187.1-P | Field mustard | cytosol | 69.72 | 69.55 |
| KRG89695 | Soybean | extracellular, mitochondrion | 5.49 | 69.23 |
| KRH51766 | Soybean | endoplasmic reticulum | 68.86 | 69.2 |
| HORVU4Hr1G062880.3 | Barley | plasma membrane, vacuole | 77.66 | 68.61 |
| KRH61086 | Soybean | cytosol, mitochondrion | 54.09 | 65.05 |
Protein Annotations
| MapMan:24.1.1.1.1 | ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0008150 | GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:HORVU2Hr1G109990 | EnsemblPlants:HORVU2Hr1G109990.2 | UniProt:M0XAF5 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 |
| PANTHER:PTHR11629:SF89 | TMHMM:TMhelix | UniParc:UPI0002951D87 | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg |
Description
V-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:M0XAF5]
Coordinates
chrchr2H:-:718584417..718593273
Molecular Weight (calculated)
92786.5 Da
IEP (calculated)
6.010
GRAVY (calculated)
0.059
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGGGCCPP MDLLRSEAMQ LVQVIIPVES ARLAVSNLGD LGLLQFKDLN ADKSPFQRAY AAQIKRCGEM ARKLRFFKEQ MSKAAILTSP TQFSGAPLEI
101: GDLEIKLGEF EAELTEVNTN NRKLQRTYNE LVEYNVLLEK TGEFFYSAQR SAAEQQREMV ADQSGDSSLE SPLLHQEMVI DPSKQVKLGS LIGLVPKQKA
201: MAFERILYRA TRGNMLLRQE SVDEPIIDPQ SGEKAVKNYF VIFYSGERAK SKILKICDAF GANRYPFPED LATQLDTIQE VSGKVSELKA TVEIGLAHRD
301: GILKNIASEY EQWNNLLKKE KAIYHTLNMF SLDVTKKCLV AEGWSPVFAT SQIQDALHRA TTYSNSEVGC IFQIINTQES PPTYFQTNKF TSSFQDIVDA
401: YGIASYQEIN PGLFTIVTFP FLFAVMFGDW GHGICIFLSA LYLIIREKKL ASQKLDDIVQ IMFDGRYVIL MMSLFSIYTG LIYNEFFSVP FELFGKSAYA
501: CHDPSCGDAT TEGLVKVRQA YPFGVDPVWH GSRSELPFLN SLKMKMSILL GIAQMNLGIV LSFFNAKYFK NTVNIWHQFV PQLIFLNSLF GYLSFLIIIK
601: WCTGSKADLY HIMIYMFLSP TDDIGENQLF PGQRIVQPVL LLLALVSVPW MLFPKPLFLK KQHEQRHQGQ HYTMLQETDE SVAQLIGQHE NPHQHEEFEF
701: SEVLVHQMIH TIEFVLGAVS NTASYLRLWA LSLAHSELSS VFYDKVLLLA WGYNNVIILV VGVIVFLFAT IIVLLSMETL SAFLHALRLH WVEFQGKFYE
801: GGGYKFAPFS FASIIEEED
101: GDLEIKLGEF EAELTEVNTN NRKLQRTYNE LVEYNVLLEK TGEFFYSAQR SAAEQQREMV ADQSGDSSLE SPLLHQEMVI DPSKQVKLGS LIGLVPKQKA
201: MAFERILYRA TRGNMLLRQE SVDEPIIDPQ SGEKAVKNYF VIFYSGERAK SKILKICDAF GANRYPFPED LATQLDTIQE VSGKVSELKA TVEIGLAHRD
301: GILKNIASEY EQWNNLLKKE KAIYHTLNMF SLDVTKKCLV AEGWSPVFAT SQIQDALHRA TTYSNSEVGC IFQIINTQES PPTYFQTNKF TSSFQDIVDA
401: YGIASYQEIN PGLFTIVTFP FLFAVMFGDW GHGICIFLSA LYLIIREKKL ASQKLDDIVQ IMFDGRYVIL MMSLFSIYTG LIYNEFFSVP FELFGKSAYA
501: CHDPSCGDAT TEGLVKVRQA YPFGVDPVWH GSRSELPFLN SLKMKMSILL GIAQMNLGIV LSFFNAKYFK NTVNIWHQFV PQLIFLNSLF GYLSFLIIIK
601: WCTGSKADLY HIMIYMFLSP TDDIGENQLF PGQRIVQPVL LLLALVSVPW MLFPKPLFLK KQHEQRHQGQ HYTMLQETDE SVAQLIGQHE NPHQHEEFEF
701: SEVLVHQMIH TIEFVLGAVS NTASYLRLWA LSLAHSELSS VFYDKVLLLA WGYNNVIILV VGVIVFLFAT IIVLLSMETL SAFLHALRLH WVEFQGKFYE
801: GGGYKFAPFS FASIIEEED
001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
Arabidopsis Description
VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.