Factsheet for Solyc07g032080.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

plastid: 26371478

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071849	Potato	cytosol	97.31	97.31
Os10t0184300-01	Rice	plasma membrane	10.64	82.86
VIT_18s0001g13410.t01	Wine grape	cytosol	78.85	79.83
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	77.51	78.47
KRH51766	Soybean	endoplasmic reticulum	76.77	77.06
Solyc01g110120.2.1	Tomato	nucleus, plastid	75.06	74.88
Os03t0251500-01	Rice	plasma membrane	74.94	74.76
EER95168	Sorghum	cytosol	74.94	74.57
Zm00001d047910_P001	Maize	plasma membrane	74.69	74.51
Zm00001d028436_P001	Maize	mitochondrion, plastid	74.82	74.45
KRH61086	Soybean	cytosol, mitochondrion	61.86	74.3
TraesCS4D01G223300.2	Wheat	cytosol	73.72	73.45
TraesCS4A01G081100.1	Wheat	cytosol	73.59	73.33
TraesCS4B01G222700.3	Wheat	cytosol	73.96	73.16
HORVU2Hr1G109990.2	Barley	vacuole	70.9	70.82
TraesCS2D01G493000.1	Wheat	cytosol	70.66	70.57
TraesCS2A01G492800.1	Wheat	cytosol	70.54	70.45
TraesCS2B01G520900.1	Wheat	cytosol	70.42	70.33
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	72.86	64.29
Solyc11g072530.1.1	Tomato	cytosol	63.81	63.74
Solyc06g075400.2.1	Tomato	cytosol	63.08	63.08

Protein Annotations

MapMan:24.1.1.1.1	ncoils:Coil	GO:GO:0000220	GO:GO:0000325	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006139	GO:GO:0006810	GO:GO:0006811	GO:GO:0007035
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986
GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016471
GO:GO:0016787	GO:GO:0019725	GO:GO:0033179	GO:GO:0046961	GO:GO:0051117	GO:GO:0070072
UniProt:K4CDF2	PFAM:PF01496	PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	EnsemblPlantsGene:Solyc07g032080.2
EnsemblPlants:Solyc07g032080.2.1	TMHMM:TMhelix	UniParc:UPI000276B01F	InterPro:V-ATPase_116kDa_su	InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg

Description

V-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:K4CDF2]

Coordinates

chr7:+:34992439..35005462

Molecular Weight (calculated)

93345.1 Da

IEP (calculated)

6.263

GRAVY (calculated)

0.039

Length

818 amino acids

Sequence
(BLAST)

001: MVDGGGCCPT MDLLRSEPMQ LVQLIIPLES AHRTVSYLGD LGLFQFKDLN VEKSPFQRTY ATQIKRCGEM ARKLRFLKEQ MTKAGITPST RTTMCPNINL
101: DELEVKLGEL EADLAEMNSN TEKLQRSYNE LLEYKLVLQK AGEFFHSAQN SATAQQKELE EHMHGERSID SPLLLEQEAF TDSSKQVKLG FVSGLVAREK
201: SMAFERFLFR ATRGNVFLKQ VVVKNPVKDP LSGSEVEKNV FVIFYSGERA KNKILKICDA FGANRYPFTD DIGRQFEMIT EVSGKLSELK TTIDIGQLHR
301: ANLLQTIGYE FDQWNLLVKQ EKFIFHTLNM LSFDVTKKCL VGEGWCPVYA TSQIQNALHR ATLDGNSQVG AIFQVLHTTE LPPTYFRTNK FTSGFQEIVD
401: AYGIAKYQEV NPAVFTVVTF PFLFAVMFGD WGHGICLFFT TLYFILRERK LSGQKLGDIM EMTFGGRYII MMMALFSIYT GFIYNEFFSV PFEIFGQSAY
501: GCRDPSCRDA TITGLVKVRD AYPFGVDPKW HGSRSELPFL NSLKMKMSIL LGVAQMNLGI ILSYFNAKFF QNNVNVWHQF VPQIIFLNSL FGYLSLLIIV
601: KWCTGSQADL YHVMIYMFLS PTDDLGENQL FPGQKYLQLL FVSLALVAVP WMLFPKPFLL KKQHEERHRG QLYAMLDSTD DSFELETHDH SHGHEEFDFS
701: EIFVHQLIHT IEFVLGAVSN TASYLRLWAL SLAHSELSSV FYDKVLLLAV GYNNLIILII GIVVFTFATV GVLLVMETLS AFLHALRLHW VEFQNKFYEG
801: DGYKFSPFSF CLISEDDD

Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)

001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E

Arabidopsis Description

VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.