CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51766	Soybean	endoplasmic reticulum	92.51	77.3
KRG89695	Soybean	extracellular, mitochondrion	6.75	70.77
Os10t0184300-01	Rice	plasma membrane	10.72	69.52
VIT_18s0001g13410.t01	Wine grape	cytosol	73.72	62.13
PGSC0003DMT400071849	Potato	cytosol	74.45	61.98
Solyc07g032080.2.1	Tomato	plastid	74.3	61.86
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	72.69	61.26
KRH29384	Soybean	endoplasmic reticulum	70.78	58.92
Zm00001d047910_P001	Maize	plasma membrane	70.93	58.9
KRH24405	Soybean	endoplasmic reticulum	70.48	58.68
EER95168	Sorghum	cytosol	70.63	58.52
TraesCS4D01G223300.2	Wheat	cytosol	70.04	58.1
Os03t0251500-01	Rice	plasma membrane	69.9	58.05
Zm00001d028436_P001	Maize	mitochondrion, plastid	70.04	58.03
TraesCS4A01G081100.1	Wheat	cytosol	69.9	57.98
TraesCS4B01G222700.3	Wheat	cytosol	69.9	57.56
TraesCS2B01G520900.1	Wheat	cytosol	65.2	54.21
HORVU2Hr1G109990.2	Barley	vacuole	65.05	54.09
TraesCS2D01G493000.1	Wheat	cytosol	64.9	53.97
TraesCS2A01G492800.1	Wheat	cytosol	64.61	53.72
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	68.72	50.49
KRH24948	Soybean	cytosol	60.06	50.0
KRG89062	Soybean	cytosol, endoplasmic reticulum	59.77	49.76
KRH10401	Soybean	cytosol, endoplasmic reticulum	59.77	49.51
KRH22944	Soybean	cytosol	59.62	49.51

Protein Annotations

MapMan:24.1.1.1.1	UniProt:A0A0R0K2V9	EMBL:ACUP02002155	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G027500	GO:GO:0000220
GO:GO:0000325	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006139
GO:GO:0006810	GO:GO:0006811	GO:GO:0007035	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016471	GO:GO:0016787	GO:GO:0019725	GO:GO:0033179
GO:GO:0046961	GO:GO:0051117	GO:GO:0070072	EnsemblPlants:KRH61086	ProteinID:KRH61086	ProteinID:KRH61086.1
PFAM:PF01496	PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	TMHMM:TMhelix	UniParc:UPI0006ED946F
InterPro:V-ATPase_116kDa_su	InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:2245660..2252361

Molecular Weight (calculated)

77696.4 Da

IEP (calculated)

6.476

GRAVY (calculated)

0.096

Length

681 amino acids

Sequence
(BLAST)

001: MARRLRLFKE QMTKAGVSPS MWSTRDDHFD LEHLEVKLEE LEAELLEINA NNEKLQHTYN ELLEYKLVLE KVGELFSSAK NKAVAHQKEL EFQTTVEGSI
101: DSPLLLEQEE TTTKQIKLGF IGGLVHREKS IPFERIIFRA ARGNLFLKQG VIEHPVLDPL SGEMVHKNVF VVFYSGERVK SKILKICDAF GANRYAFSND
201: SSKQFQTIRE VSGRISELKA TIDAALIHRS TLLQTIGYHH GQWRLLIHKV LQRATMDCSS QVVAIFQVLE TTESPPTYFC TNKFTSSFQE IVDAYGIAKY
301: QEANPGVYTV VTFPFLFAVM FGDWGHGICL LLAALYLMIR ERKFASQKLG DIMEMAFGGR YIIMMMALFS IYTGDASTTG FIKVRSTYPF GVDPKCHGTR
401: SELPFLNSLK MKMSILLGVS QMNLGIIMSY FNAKYFKNNI NIWYQFVPQI IFLNSLFGYL SLLIIIKWST GSQADLYHLM IYTFLSPTDD LGENQLFVGQ
501: KLLQLVLLLL AVVAVPWMLL PKPFLLKKQH QERHQGQSYD LLCGTDDTLE SESQSIAHDH DEFDFSEVFV HQLIHTIEFV LGAVSNTASS LRFLAHSELS
601: SVFYDKVLLL AWGYNNTIVL IIGIFVFICA TVGVLLLMES PSAFLHALRL HWVEYQNKFY EGDGYKFFPF SFTLLTDEDE L

Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)

001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E

Arabidopsis Description

VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.