CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0184300-01	Rice	plasma membrane	16.92	10.48
KRH61086	Soybean	cytosol, mitochondrion	70.77	6.75
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	73.85	5.94
Os03t0251500-01	Rice	plasma membrane	73.85	5.85
Zm00001d047910_P001	Maize	plasma membrane	73.85	5.85
EER95168	Sorghum	cytosol	73.85	5.84
Bra030300.1-P	Field mustard	cytosol	72.31	5.75
KRH29384	Soybean	endoplasmic reticulum	72.31	5.75
KRH24405	Soybean	endoplasmic reticulum	72.31	5.75
CDY15895	Canola	cytosol	72.31	5.74
Bra031187.1-P	Field mustard	cytosol	72.31	5.72
CDX82029	Canola	cytosol	72.31	5.72
Zm00001d028436_P001	Maize	mitochondrion, plastid	72.31	5.72
CDX99594	Canola	cytosol	72.31	5.71
KRH51766	Soybean	endoplasmic reticulum	70.77	5.64
TraesCS2A01G492800.1	Wheat	cytosol	70.77	5.62
TraesCS2B01G520900.1	Wheat	cytosol	70.77	5.62
TraesCS2D01G493000.1	Wheat	cytosol	70.77	5.62
AT2G21410.1	Thale cress	cytosol	70.77	5.6
TraesCS4A01G081100.1	Wheat	cytosol	70.77	5.6
TraesCS4D01G223300.2	Wheat	cytosol	70.77	5.6
TraesCS4B01G222700.3	Wheat	cytosol	70.77	5.56
CDY41958	Canola	cytosol	69.23	5.51
CDY42603	Canola	cytosol	69.23	5.5
HORVU2Hr1G109990.2	Barley	vacuole	69.23	5.49
CDX90307	Canola	cytosol	69.23	5.49
Bra010712.1-P	Field mustard	cytosol	69.23	5.49
Solyc01g110120.2.1	Tomato	nucleus, plastid	69.23	5.49
CDY12118	Canola	cytosol	69.23	5.49
AT4G39080.1	Thale cress	cytosol, nucleus, plasma membrane	69.23	5.48
VIT_03s0038g00290.t01	Wine grape	cytosol	69.23	5.47
KRH24948	Soybean	cytosol	64.62	5.13
KRG89062	Soybean	cytosol, endoplasmic reticulum	64.62	5.13
KRH22944	Soybean	cytosol	64.62	5.12
KRH10401	Soybean	cytosol, endoplasmic reticulum	64.62	5.11
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	70.77	4.96
Bra011878.1-P	Field mustard	cytosol	52.31	4.55
CDY13818	Canola	cytosol, nucleus, plastid	35.38	2.88
CDY71986	Canola	cytosol	3.08	0.9
CDX96169	Canola	cytosol, plasma membrane, plastid	3.08	0.87
CDY61341	Canola	cytosol	1.54	0.35

Protein Annotations

MapMan:35.2	EMBL:ACUP02012256	EnsemblPlantsGene:GLYMA_20G041400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0015992
GO:GO:0016020	GO:GO:0033179	UniProt:K7N1F4	EnsemblPlants:KRG89695	ProteinID:KRG89695	ProteinID:KRG89695.1
PFAM:PF01496	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	UniParc:UPI00029649E9	InterPro:V-ATPase_116kDa_su	SEG:seg

Description

hypothetical protein

Coordinates

chr20:+:7274942..7275469

Molecular Weight (calculated)

7419.1 Da

IEP (calculated)

6.794

GRAVY (calculated)

0.206

Length

65 amino acids

Sequence
(BLAST)

1: MKMSILLGVA RMNQLFVAHM RVCKWSHHGH EEFEFSEVFV HQLIHTIEFV LGAVSNTDLP PSMGP

Best Arabidopsis Sequence Match ( AT4G39080.1 )
(BLAST)

001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E

Arabidopsis Description

VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.