Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61341 | Canola | cytosol | 30.41 | 84.97 |
| CDX82029 | Canola | cytosol | 85.61 | 83.31 |
| CDY71986 | Canola | cytosol | 22.65 | 81.17 |
| CDX99594 | Canola | cytosol | 82.73 | 80.32 |
| AT2G21410.1 | Thale cress | cytosol | 82.48 | 80.27 |
| CDY15895 | Canola | cytosol | 81.73 | 79.73 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 22.28 | 77.73 |
| CDY41958 | Canola | cytosol | 77.97 | 76.25 |
| CDX90307 | Canola | cytosol | 77.6 | 75.7 |
| CDY42603 | Canola | cytosol | 77.47 | 75.67 |
| CDY12118 | Canola | cytosol | 77.6 | 75.61 |
| CDX80454 | Canola | extracellular | 6.63 | 74.65 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 67.71 | 65.82 |
| KRH24405 | Soybean | endoplasmic reticulum | 66.33 | 64.79 |
| KRH29384 | Soybean | endoplasmic reticulum | 65.96 | 64.43 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 65.33 | 63.66 |
| CDY15756 | Canola | cytosol | 50.69 | 50.69 |
| CDY04571 | Canola | cytosol | 50.31 | 50.63 |
| CDY53381 | Canola | cytosol | 50.56 | 50.56 |
| CDX83292 | Canola | cytosol | 52.07 | 50.55 |
| CDX77187 | Canola | cytosol | 49.81 | 50.13 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 52.07 | 48.94 |
| CDX83291 | Canola | cytosol | 10.64 | 46.7 |
| CDX89488 | Canola | cytosol | 7.63 | 45.52 |
| KRG89695 | Soybean | extracellular, mitochondrion | 2.88 | 35.38 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078FN77 | UniProt:A0A078FN77 | EnsemblPlants:CDY13818 | ProteinID:CDY13818 | ProteinID:CDY13818.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00078260001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix |
| UniParc:UPI0004EDB697 | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaA09g43200DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078FN77]
Coordinates
chrLK032038:-:517351..522951
Molecular Weight (calculated)
90300.6 Da
IEP (calculated)
7.125
GRAVY (calculated)
-0.067
Length
799 amino acids
Sequence
(BLAST)
(BLAST)
001: MADIRGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKDQMSKAGV SPKVILDKDI
101: DIDLDDVEVK LGELEAELVE INANNDKLQR SYNELVEYKL VLEKAGDFFA SAHRSATAQQ SEIESQQVGE DVLETPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGRQAQ MMTEVSGRLA ELKTTINAGL
301: DHRKILLETI GDKFEQWNLK VRKEKAIYHT LNMLSLDVTK KCLVGEGWSP LFAAPEIQEA LQRAGVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPTVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAP
501: SAYECRDASC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILLGVAQMN LGIIMSFCNA KFFKSAVNVW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKTV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGQSYAQLD ETDEICAWSC FQHCFLSSSM
701: GPQSCALVVV VSLLREGSPY GVGFQQYIHP YRWDPRLHLC NGGSASGDGD VERVPSRPAS SLGGVSEQVL RRRWLQVCSL HFHTRRKRRR VSDDGSFLD
101: DIDLDDVEVK LGELEAELVE INANNDKLQR SYNELVEYKL VLEKAGDFFA SAHRSATAQQ SEIESQQVGE DVLETPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGRQAQ MMTEVSGRLA ELKTTINAGL
301: DHRKILLETI GDKFEQWNLK VRKEKAIYHT LNMLSLDVTK KCLVGEGWSP LFAAPEIQEA LQRAGVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPTVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAP
501: SAYECRDASC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILLGVAQMN LGIIMSFCNA KFFKSAVNVW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKTV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGQSYAQLD ETDEICAWSC FQHCFLSSSM
701: GPQSCALVVV VSLLREGSPY GVGFQQYIHP YRWDPRLHLC NGGSASGDGD VERVPSRPAS SLGGVSEQVL RRRWLQVCSL HFHTRRKRRR VSDDGSFLD
001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
Arabidopsis Description
VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.