CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80454	Canola	extracellular	38.81	73.24
CDX83291	Canola	cytosol	25.37	18.68
CDY12118	Canola	cytosol	50.75	8.29
CDX99594	Canola	cytosol	49.25	8.02
CDY15895	Canola	cytosol	48.51	7.94
CDX90307	Canola	cytosol	47.76	7.81
CDX82029	Canola	cytosol	47.76	7.8
CDY41958	Canola	cytosol	47.01	7.71
CDY42603	Canola	cytosol	47.01	7.7
CDY13818	Canola	cytosol, nucleus, plastid	45.52	7.63
Zm00001d028436_P001	Maize	mitochondrion, plastid	45.52	7.42
Zm00001d047910_P001	Maize	plasma membrane	44.78	7.32
EER95168	Sorghum	cytosol	44.03	7.18
Os03t0251500-01	Rice	plasma membrane	43.28	7.07
TraesCS4A01G081100.1	Wheat	cytosol	41.79	6.82
TraesCS4D01G223300.2	Wheat	cytosol	41.79	6.82
TraesCS4B01G222700.3	Wheat	cytosol	41.79	6.77
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	38.06	6.31
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	42.54	6.15
CDY53381	Canola	cytosol	32.84	5.51
CDY15756	Canola	cytosol	32.84	5.51
CDX77187	Canola	cytosol	32.09	5.42
CDY04571	Canola	cytosol	32.09	5.42
CDX83292	Canola	cytosol	32.84	5.35
CDY63878	Canola	cytosol, plasma membrane, plastid	32.84	5.18
CDX96169	Canola	cytosol, plasma membrane, plastid	4.48	2.62
CDY61341	Canola	cytosol	4.48	2.1
CDY71986	Canola	cytosol	2.99	1.79

Protein Annotations

EnsemblPlants:CDX89488	EnsemblPlantsGene:GSBRNA2T00149753001	GO:A0A078DQK0	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0033179
InterPro:V-ATPase_116kDa_su	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	ProteinID:CDX89488	ProteinID:CDX89488.1	UniParc:UPI0004EF1D68
MapMan:15.5.15	:	:	:	:	:

Description

BnaC04g35070D

Coordinates

chrLK031859:-:330170..331048

Molecular Weight (calculated)

14984.4 Da

IEP (calculated)

6.970

GRAVY (calculated)

0.089

Length

134 amino acids

Sequence
(BLAST)

001: MAENRGGGGC CPPMDLMRSE PMQLVQVIVP MESAHLTVSY LGDLGLVQFK DVNFMEALSE RNFDEAIEHR CEFLPCHRFS YTGTKCLADL CGALHCDFVL
101: SSKKAKSKCN PAAAAKNRHF CEVSFFVMFI LLLR

Best Arabidopsis Sequence Match ( AT5G63280.1 )
(BLAST)

001: MGRLWESLPV ILLLLVLLLH QSVSQGFEES ESTRLVNEEV EVSNAPEIHC SRERSRAAWQ IIQDYLTPFV ERERYEIPKN CRLHPDNDLY RDQEHHKVHV
101: DVFEWKCGYC KKSFNDEKFL DKHFSTRHYN LLNTTDTKCL ADLCGALHCD FVLSSKKPKS KCNPPAVAKN RHLCESVANS CFPVSQGPSA SRLHEHFLRQ
201: FCDAHTCTGN DKPFPRGGKK KSGVFYLAIS ILTLMLLPLF YLLVFLHQRE KRSGTQDLRR IIKSGKKTKP S

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q8VZP2]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.