CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71986	Canola	cytosol	92.14	94.62
CDY61341	Canola	cytosol	92.14	73.78
CDY13818	Canola	cytosol, nucleus, plastid	77.73	22.28
CDX82029	Canola	cytosol	79.04	22.05
CDX99594	Canola	cytosol	75.98	21.14
AT2G21410.1	Thale cress	cytosol	75.11	20.95
CDY15895	Canola	cytosol	74.67	20.88
CDY41958	Canola	cytosol	70.74	19.83
CDY42603	Canola	cytosol	70.74	19.8
CDX90307	Canola	cytosol	70.31	19.66
CDY12118	Canola	cytosol	69.87	19.51
VIT_03s0038g00290.t01	Wine grape	cytosol	64.63	18.0
KRH29384	Soybean	endoplasmic reticulum	63.32	17.73
KRH24405	Soybean	endoplasmic reticulum	63.32	17.73
Solyc01g110120.2.1	Tomato	nucleus, plastid	60.7	16.95
CDX77187	Canola	cytosol	51.97	14.99
CDY04571	Canola	cytosol	51.97	14.99
CDY53381	Canola	cytosol	51.53	14.77
CDY15756	Canola	cytosol	51.09	14.64
CDX83292	Canola	cytosol	51.97	14.46
CDY63878	Canola	cytosol, plasma membrane, plastid	51.97	14.0
CDX89488	Canola	cytosol	2.62	4.48
CDX83291	Canola	cytosol	3.49	4.4
KRG89695	Soybean	extracellular, mitochondrion	0.87	3.08
CDX80454	Canola	extracellular	0.87	2.82

Protein Annotations

EnsemblPlants:CDX96169	EnsemblPlantsGene:GSBRNA2T00102235001	GO:A0A078E681	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0016020	GO:GO:0033179
InterPro:V-ATPase_116kDa_su	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	PFAM:PF01496	ProteinID:CDX96169	ProteinID:CDX96169.1
TMHMM:TMhelix	UniParc:UPI0004EE0AA9	MapMan:24.1.1.1.1	:	:	:

Description

BnaC02g14820D

Coordinates

chrLK031893:-:146533..148283

Molecular Weight (calculated)

26210.2 Da

IEP (calculated)

8.856

GRAVY (calculated)

0.155

Length

229 amino acids

Sequence
(BLAST)

001: MVIEIGKLFD VERLLYLQKG SIISSDRWVG YVCAYTVSIH GRVSCMLQSL KTTISDGLDH LKILLETIGD KFEQWNLKVR KEKAIYHTLN MLSLDVTKKC
101: LVGEGWSPLF AAPEIQEALQ RAAVDSNSQV GSIFQVLRTK EMPQTFFRTN KFTTAFQEIV DAYSVAKYQE ANPTVFTIVT FPFLFAVMFG DWGHGICLLL
201: ATMYLILREK KLSSQLRAYF ILNNFHRMV

Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)

001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E

Arabidopsis Description

VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.