Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77187 | Canola | cytosol | 96.0 | 96.6 |
| CDY15756 | Canola | cytosol | 96.5 | 96.5 |
| Bra035693.1-P | Field mustard | cytosol | 98.62 | 96.1 |
| CDX83291 | Canola | cytosol | 21.65 | 95.05 |
| CDY04571 | Canola | cytosol | 94.24 | 94.84 |
| CDX83292 | Canola | cytosol | 96.87 | 94.05 |
| AT2G28520.1 | Thale cress | cytosol | 94.62 | 92.53 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 96.75 | 90.94 |
| VIT_06s0004g03450.t01 | Wine grape | cytosol | 81.1 | 79.22 |
| KRH22944 | Soybean | cytosol | 79.6 | 77.56 |
| Solyc06g075400.2.1 | Tomato | cytosol | 79.35 | 77.51 |
| PGSC0003DMT400019381 | Potato | cytosol | 79.22 | 77.38 |
| PGSC0003DMT400065278 | Potato | cytosol | 79.1 | 77.17 |
| KRH10401 | Soybean | cytosol, endoplasmic reticulum | 79.22 | 77.01 |
| KRH24948 | Soybean | cytosol | 78.72 | 76.89 |
| Solyc11g072530.1.1 | Tomato | cytosol | 78.72 | 76.8 |
| KRG89062 | Soybean | cytosol, endoplasmic reticulum | 78.35 | 76.53 |
| GSMUA_Achr7P22660_001 | Banana | cytosol | 74.72 | 73.79 |
| EES03840 | Sorghum | cytosol | 72.09 | 70.42 |
| Zm00001d012446_P002 | Maize | cytosol | 71.34 | 69.68 |
| Os01t0834200-01 | Rice | cytosol | 70.84 | 69.19 |
| TraesCS3B01G385500.1 | Wheat | cytosol | 70.59 | 69.03 |
| TraesCS3D01G346900.1 | Wheat | golgi, unclear | 70.46 | 68.91 |
| TraesCS3A01G352800.1 | Wheat | cytosol | 70.09 | 68.54 |
| Zm00001d042969_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 19.77 | 67.23 |
| CDY41958 | Canola | cytosol | 62.45 | 61.08 |
| CDY42603 | Canola | cytosol | 62.45 | 61.0 |
| CDX90307 | Canola | cytosol | 62.45 | 60.93 |
| CDY12118 | Canola | cytosol | 62.2 | 60.61 |
| CDX99594 | Canola | cytosol | 61.7 | 59.9 |
| CDY15895 | Canola | cytosol | 61.33 | 59.83 |
| CDX82029 | Canola | cytosol | 61.08 | 59.44 |
| VIT_13s0175g00200.t01 | Wine grape | cytosol | 14.14 | 58.85 |
| KXG29301 | Sorghum | cytosol | 3.13 | 58.14 |
| CDY61341 | Canola | cytosol | 20.15 | 56.29 |
| Zm00001d046282_P001 | Maize | cytosol | 10.14 | 55.86 |
| Zm00001d040680_P001 | Maize | mitochondrion | 7.63 | 53.51 |
| CDY71986 | Canola | cytosol | 14.77 | 52.91 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 14.77 | 51.53 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 50.56 | 50.56 |
| CDX80454 | Canola | extracellular | 4.01 | 45.07 |
| CDX89488 | Canola | cytosol | 5.51 | 32.84 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078IU51 | UniProt:A0A078IU51 | EnsemblPlants:CDY53381 | ProteinID:CDY53381 | ProteinID:CDY53381.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00010597001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF72 | TMHMM:TMhelix |
| UniParc:UPI0004EED59F | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaA04g16460DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078IU51]
Coordinates
chrLK033195:+:38352..43667
Molecular Weight (calculated)
91606.8 Da
IEP (calculated)
5.995
GRAVY (calculated)
-0.030
Length
799 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFLDKLPE MDLMRSEKMT LVQLIIPVES AHRCVTYLGE LGLLQFRDLN ADKSPFQRTF ATQVKRCGEM SRKLRFFKDQ IDKAGLRCLP RHEIEPDIEL
101: GDLERQLADH EHEVLEMNSN SEKLRLTYNE LLEFKIVLQK ASGFLVSSNA HAIGDETELH ESTYSNNGFI ESSSLLEQEM RHEPLNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTPSDEEIMD PSTSEMVEKI VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNAVGY SLTKWMTTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSNSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDATCSD AYTVGLVKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQA RKIHMERFQG RTYGVLGTSE VDLDVEPDSA RGHQEEEFNF SEIFVHQLIH SIEFVLGSVS
701: NTASYLRLWA LSLAHSELST VFYEKVLLLA WGYENILIRL IGVVVFAFAT AFILLMMETL SAFLHALRLH WVEFMGKFFH GDGYKFKPFS FALISDDDE
101: GDLERQLADH EHEVLEMNSN SEKLRLTYNE LLEFKIVLQK ASGFLVSSNA HAIGDETELH ESTYSNNGFI ESSSLLEQEM RHEPLNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTPSDEEIMD PSTSEMVEKI VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNAVGY SLTKWMTTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSNSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDATCSD AYTVGLVKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQA RKIHMERFQG RTYGVLGTSE VDLDVEPDSA RGHQEEEFNF SEIFVHQLIH SIEFVLGSVS
701: NTASYLRLWA LSLAHSELST VFYEKVLLLA WGYENILIRL IGVVVFAFAT AFILLMMETL SAFLHALRLH WVEFMGKFFH GDGYKFKPFS FALISDDDE
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Arabidopsis Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.