Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53381 | Canola | cytosol | 92.53 | 94.62 |
| CDY15756 | Canola | cytosol | 91.92 | 93.99 |
| CDX77187 | Canola | cytosol | 91.31 | 93.95 |
| CDY04571 | Canola | cytosol | 91.31 | 93.95 |
| CDX83292 | Canola | cytosol | 93.88 | 93.2 |
| Bra035693.1-P | Field mustard | cytosol | 92.41 | 92.07 |
| Bra011941.1-P | Field mustard | cytosol | 92.17 | 91.72 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 94.0 | 90.35 |
| CDX83291 | Canola | cytosol | 19.95 | 89.56 |
| VIT_06s0004g03450.t01 | Wine grape | cytosol | 82.25 | 82.15 |
| KRH22944 | Soybean | cytosol | 80.66 | 80.37 |
| KRH10401 | Soybean | cytosol, endoplasmic reticulum | 80.54 | 80.05 |
| PGSC0003DMT400019381 | Potato | cytosol | 80.05 | 79.95 |
| Solyc06g075400.2.1 | Tomato | cytosol | 80.05 | 79.95 |
| KRH24948 | Soybean | cytosol | 79.8 | 79.71 |
| KRG89062 | Soybean | cytosol, endoplasmic reticulum | 79.44 | 79.34 |
| PGSC0003DMT400065278 | Potato | cytosol | 79.19 | 79.0 |
| Solyc11g072530.1.1 | Tomato | cytosol | 78.83 | 78.63 |
| Bra000490.1-P | Field mustard | cytosol | 91.06 | 77.91 |
| GSMUA_Achr7P22660_001 | Banana | cytosol | 75.28 | 76.02 |
| EES03840 | Sorghum | cytosol | 72.7 | 72.62 |
| Zm00001d012446_P002 | Maize | cytosol | 72.22 | 72.13 |
| Zm00001d042969_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 20.69 | 71.91 |
| Os01t0834200-01 | Rice | cytosol | 71.36 | 71.27 |
| TraesCS3B01G385500.1 | Wheat | cytosol | 70.99 | 70.99 |
| TraesCS3D01G346900.1 | Wheat | golgi, unclear | 70.87 | 70.87 |
| TraesCS3A01G352800.1 | Wheat | cytosol | 70.5 | 70.5 |
| VIT_13s0175g00200.t01 | Wine grape | cytosol | 14.81 | 63.02 |
| AT4G39080.1 | Thale cress | cytosol, nucleus, plasma membrane | 62.3 | 62.0 |
| AT2G21410.1 | Thale cress | cytosol | 61.08 | 60.78 |
| Zm00001d046282_P001 | Maize | cytosol | 10.4 | 58.62 |
| KXG29301 | Sorghum | cytosol | 2.94 | 55.81 |
| Zm00001d040680_P001 | Maize | mitochondrion | 7.71 | 55.26 |
Protein Annotations
| MapMan:24.1.1.1.1 | EntrezGene:817400 | ProteinID:AAD21487.2 | ProteinID:AEC08134.1 | EMBL:AK229960 | ArrayExpress:AT2G28520 |
| EnsemblPlantsGene:AT2G28520 | RefSeq:AT2G28520 | TAIR:AT2G28520 | RefSeq:AT2G28520-TAIR-G | EnsemblPlants:AT2G28520.1 | TAIR:AT2G28520.1 |
| EMBL:AY091008 | Unigene:At.38612 | ncoils:Coil | GO:GO:0000220 | GO:GO:0000325 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 |
| GO:GO:0005802 | GO:GO:0006139 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007035 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0012510 | GO:GO:0015078 | GO:GO:0015986 |
| GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016471 |
| GO:GO:0016787 | GO:GO:0019725 | GO:GO:0033179 | GO:GO:0046961 | GO:GO:0051117 | GO:GO:0070070 |
| GO:GO:0070072 | RefSeq:NP_850122.1 | PFAM:PF01496 | PIRSF:PIRSF001293 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF72 | UniProt:Q8RWZ7 | TMHMM:TMhelix | UniParc:UPI00000AB16B |
| InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | Symbol:VHA-A1 | SEG:seg | : | : |
Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
Coordinates
chr2:+:12209800..12216077
Molecular Weight (calculated)
93420.4 Da
IEP (calculated)
6.355
GRAVY (calculated)
0.046
Length
817 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.