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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plasma membrane 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES03840 Sorghum cytosol 91.32 91.32
Zm00001d012446_P002 Maize cytosol 89.98 89.98
TraesCS3B01G385500.1 Wheat cytosol 89.61 89.72
TraesCS3D01G346900.1 Wheat golgi, unclear 89.49 89.6
TraesCS3A01G352800.1 Wheat cytosol 89.12 89.23
Zm00001d042969_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 24.82 86.38
KXG29301 Sorghum cytosol 4.28 81.4
GSMUA_Achr7P22660_001 Banana cytosol 78.61 79.48
Zm00001d046282_P001 Maize cytosol 14.06 79.31
Zm00001d040680_P001 Maize mitochondrion 10.76 77.19
Os10t0184300-01 Rice plasma membrane 9.66 75.24
KRH22944 Soybean cytosol 74.82 74.63
KRH10401 Soybean cytosol, endoplasmic reticulum 74.45 74.09
KRH24948 Soybean cytosol 73.84 73.84
Solyc11g072530.1.1 Tomato cytosol 73.84 73.75
PGSC0003DMT400065278 Potato cytosol 73.72 73.63
Solyc06g075400.2.1 Tomato cytosol 73.23 73.23
PGSC0003DMT400019381 Potato cytosol 73.11 73.11
KRG89062 Soybean cytosol, endoplasmic reticulum 72.74 72.74
CDY04571 Canola cytosol 69.32 71.41
AT2G28520.1 Thale cress cytosol 71.27 71.36
CDY15756 Canola cytosol 69.56 71.21
CDX83292 Canola cytosol 71.52 71.08
CDX77187 Canola cytosol 68.83 70.91
CDY53381 Canola cytosol 69.19 70.84
Bra011941.1-P Field mustard cytosol 69.8 69.55
Bra035693.1-P Field mustard cytosol 69.19 69.02
CDY63878 Canola cytosol, plasma membrane, plastid 71.64 68.94
Os03t0251500-01 Rice plasma membrane 61.25 61.1
CDX83291 Canola cytosol 13.2 59.34
Bra000490.1-P Field mustard cytosol 69.19 59.27
VIT_13s0175g00190.t01 Wine grape extracellular 3.91 50.79
Protein Annotations
MapMan:24.1.1.1.1EntrezGene:4327412EMBL:AK100543ProteinID:BAD73785.1ProteinID:BAF06632.2ProteinID:BAS75086.1
ncoils:CoilGO:GO:0000220GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005768GO:GO:0005773GO:GO:0005794GO:GO:0005802GO:GO:0006139GO:GO:0006810
GO:GO:0006811GO:GO:0007035GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0012510GO:GO:0015078GO:GO:0015986GO:GO:0015991GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016471GO:GO:0016787GO:GO:0019725GO:GO:0033179GO:GO:0046961
GO:GO:0051117GO:GO:0070070GO:GO:0070072EnsemblPlantsGene:Os01g0834200EnsemblPlants:Os01t0834200-01PFAM:PF01496
PIRSF:PIRSF001293PANTHER:PTHR11629PANTHER:PTHR11629:SF72UniProt:Q5QLD9TMHMM:TMhelixUniParc:UPI000048E079
InterPro:V-ATPase_116kDa_suInterPro:V-type_ATPase_116kDa_su_eukaRefSeq:XP_015620007.1SEG:seg::
Description
Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-01);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-02);Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-03);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-04)
Coordinates
chr1:+:35732665..35743682
Molecular Weight (calculated)
93046.1 Da
IEP (calculated)
6.440
GRAVY (calculated)
0.029
Length
818 amino acids
Sequence
(BLAST)
001: MGVFDRLPPM DRLRSEKMCF VQLIIPAESA RLAVTYLGEL GLLQFKDLNE DKSPFQRIFV NQVKRCSEMS RKLRFFNDQI NKAGVKSSVR PAMQPDIDLE
101: ELEAKLREHE NDLLEMNTNS EKLLQTYNEL LEFKMVLSKA GGILASSHNH AAPAERELDE HIYDKEMDDG NAYLLEQGVH LGASENSGVK FVSGIILKSK
201: AMAFERMLFR ATRGNMFFNQ APAGEPVTDP ISGEEVEKTV FVVFFSGDQA KAKILKICGS FGASCYPVPE EMVKQRQIFR EVSGRLADLE ATLDAGIQHR
301: NKALESVGSQ LWRWTIMVKK EKAVYDTLNM LNFDVTKKCL VGEGWCPIFA KSQIKDVLQR ATLHSNSQVG IIFHEMDTID SPPTYFQTDK FTNAFQEIVD
401: AYGIARYEEA NPAVYSVITF PFLFAVMFGD WGHGICLLLG ACVLILREKK LSSQKLGSFM EMAFGGRYVI LLMALFSIYC GLIYNEFFSV PFHIFGKSAY
501: ECREKTCSDA HTAGLIKVRD PYPFGVDPSW RGSRSELPFL NSLKMKMSIL MGVTQMNLGI VLSYFDAKFH GNALDIRYQF IPQMIFLNSL FGYLALLILI
601: KWCTGSQADL YHVMIYMFLD PSGNLGENQL FWGQKELQIL LLLMAIVAVP WMLFPKPFIL KKLHKERFQG HTYRFLGTSE MDPDSEPDSA RSRHDDFNFS
701: EVFVHQMIHS IEFVLGAVSN TASYLRLWAL SLAHSELSTV FYEKLLVLAW GYDNLVVKLV GLVIFSFATA FILLGMESLS AFLHALRLHW VEFMNKFYHG
801: DGYKFRPFSF ALLADDED
Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Arabidopsis Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.