Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53381 | Canola | cytosol | 96.5 | 96.5 |
| CDY04571 | Canola | cytosol | 95.49 | 96.1 |
| CDX77187 | Canola | cytosol | 93.62 | 94.21 |
| CDX83291 | Canola | cytosol | 21.28 | 93.41 |
| CDX83292 | Canola | cytosol | 96.0 | 93.2 |
| AT2G28520.1 | Thale cress | cytosol | 93.99 | 91.92 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 95.87 | 90.12 |
| VIT_06s0004g03450.t01 | Wine grape | cytosol | 81.73 | 79.83 |
| KRH22944 | Soybean | cytosol | 80.48 | 78.41 |
| KRH10401 | Soybean | cytosol, endoplasmic reticulum | 80.1 | 77.86 |
| PGSC0003DMT400065278 | Potato | cytosol | 79.47 | 77.53 |
| KRH24948 | Soybean | cytosol | 79.35 | 77.51 |
| Solyc06g075400.2.1 | Tomato | cytosol | 79.35 | 77.51 |
| PGSC0003DMT400019381 | Potato | cytosol | 79.22 | 77.38 |
| KRG89062 | Soybean | cytosol, endoplasmic reticulum | 79.22 | 77.38 |
| Solyc11g072530.1.1 | Tomato | cytosol | 79.1 | 77.17 |
| GSMUA_Achr7P22660_001 | Banana | cytosol | 74.97 | 74.04 |
| EES03840 | Sorghum | cytosol | 72.59 | 70.9 |
| Zm00001d012446_P002 | Maize | cytosol | 71.84 | 70.17 |
| TraesCS3B01G385500.1 | Wheat | cytosol | 71.34 | 69.77 |
| TraesCS3D01G346900.1 | Wheat | golgi, unclear | 71.21 | 69.64 |
| Os01t0834200-01 | Rice | cytosol | 71.21 | 69.56 |
| TraesCS3A01G352800.1 | Wheat | cytosol | 70.84 | 69.28 |
| Zm00001d042969_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 19.9 | 67.66 |
| CDY42603 | Canola | cytosol | 62.7 | 61.25 |
| CDY41958 | Canola | cytosol | 62.45 | 61.08 |
| CDX90307 | Canola | cytosol | 62.58 | 61.05 |
| VIT_13s0175g00200.t01 | Wine grape | cytosol | 14.64 | 60.94 |
| CDY12118 | Canola | cytosol | 62.33 | 60.73 |
| CDX99594 | Canola | cytosol | 61.83 | 60.02 |
| CDY15895 | Canola | cytosol | 61.45 | 59.95 |
| CDX82029 | Canola | cytosol | 61.33 | 59.68 |
| KXG29301 | Sorghum | cytosol | 3.13 | 58.14 |
| Zm00001d046282_P001 | Maize | cytosol | 10.39 | 57.24 |
| CDY61341 | Canola | cytosol | 19.9 | 55.59 |
| Zm00001d040680_P001 | Maize | mitochondrion | 7.76 | 54.39 |
| CDY71986 | Canola | cytosol | 14.64 | 52.47 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 14.64 | 51.09 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 50.69 | 50.69 |
| CDX80454 | Canola | extracellular | 4.26 | 47.89 |
| CDX89488 | Canola | cytosol | 5.51 | 32.84 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078FRI2 | UniProt:A0A078FRI2 | EnsemblPlants:CDY15756 | ProteinID:CDY15756 | ProteinID:CDY15756.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00090006001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF72 | TMHMM:TMhelix |
| UniParc:UPI0004EDC743 | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaC04g15680DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078FRI2]
Coordinates
chrLK032057:+:290353..296368
Molecular Weight (calculated)
91587.7 Da
IEP (calculated)
6.190
GRAVY (calculated)
-0.057
Length
799 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRCVTYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RHELEPYIEL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLQK ANGFLVSSNA HATGDETELH EGTYSNNGFI ETSSLLEQEM RPEPLNQSGL RFISGIINKD
201: KLLRFERMLF RATRGNMLFN QTPSDEEIMD PSTSEMVEKI VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNAVGY SLTKWMTTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSNSQV GVIFHIMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLTRER KLSSQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHVFGGSA
501: YKCRDTTCSD AYTVGLVKYR DPYPFGVDPS WRGSRSELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQA QKIHMERFQG RTYGVLGTSE VDLDVEPGSA RGHQEEEFNF SEIFVHQLIH SIEFVLGSVS
701: NTASYLRLWA LSLAHSELST VFYEKVLLLA WGYENILIRL IGLVVFAFAT AFILLMMETL SAFLHALRLH WVEFMGKFFH GDGYKFKPFS FALVSNDDE
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLQK ANGFLVSSNA HATGDETELH EGTYSNNGFI ETSSLLEQEM RPEPLNQSGL RFISGIINKD
201: KLLRFERMLF RATRGNMLFN QTPSDEEIMD PSTSEMVEKI VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNAVGY SLTKWMTTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSNSQV GVIFHIMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLTRER KLSSQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHVFGGSA
501: YKCRDTTCSD AYTVGLVKYR DPYPFGVDPS WRGSRSELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQA QKIHMERFQG RTYGVLGTSE VDLDVEPGSA RGHQEEEFNF SEIFVHQLIH SIEFVLGSVS
701: NTASYLRLWA LSLAHSELST VFYEKVLLLA WGYENILIRL IGLVVFAFAT AFILLMMETL SAFLHALRLH WVEFMGKFFH GDGYKFKPFS FALVSNDDE
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Arabidopsis Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.