Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 94.62 | 92.14 |
| CDY61341 | Canola | cytosol | 92.38 | 72.03 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 81.17 | 22.65 |
| CDX82029 | Canola | cytosol | 82.06 | 22.29 |
| CDX99594 | Canola | cytosol | 79.37 | 21.51 |
| CDY15895 | Canola | cytosol | 78.03 | 21.25 |
| AT2G21410.1 | Thale cress | cytosol | 77.58 | 21.07 |
| CDY41958 | Canola | cytosol | 73.54 | 20.07 |
| CDY42603 | Canola | cytosol | 73.54 | 20.05 |
| CDX90307 | Canola | cytosol | 73.54 | 20.02 |
| CDY12118 | Canola | cytosol | 73.09 | 19.88 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 67.71 | 18.37 |
| KRH24405 | Soybean | endoplasmic reticulum | 65.92 | 17.97 |
| KRH29384 | Soybean | endoplasmic reticulum | 65.92 | 17.97 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 63.68 | 17.32 |
| CDY04571 | Canola | cytosol | 53.36 | 14.99 |
| CDX77187 | Canola | cytosol | 53.36 | 14.99 |
| CDY53381 | Canola | cytosol | 52.91 | 14.77 |
| CDY15756 | Canola | cytosol | 52.47 | 14.64 |
| CDX83292 | Canola | cytosol | 53.36 | 14.46 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 53.36 | 14.0 |
| CDX83291 | Canola | cytosol | 2.69 | 3.3 |
| KRG89695 | Soybean | extracellular, mitochondrion | 0.9 | 3.08 |
| CDX89488 | Canola | cytosol | 1.79 | 2.99 |
| CDX80454 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078K2G1 | UniProt:A0A078K2G1 | EnsemblPlants:CDY71986 | ProteinID:CDY71986 | ProteinID:CDY71986.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00022955001 | PFAM:PF01496 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix | UniParc:UPI0004EEDFB5 |
| InterPro:V-ATPase_116kDa_su | : | : | : | : | : |
Description
BnaCnng75420DV-type proton ATPase subunit a (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K2G1]
Coordinates
chrLK048418:-:423..1853
Molecular Weight (calculated)
25530.2 Da
IEP (calculated)
8.856
GRAVY (calculated)
0.129
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: KLFDVERLLY LQKGSIVSSD RWVGYVCAYT VSIHGRVSGW LAELKTTISD GLDHRKILLE TIGDKFEQWN LKVRKEKAIY HTLNMLSLDV TKKCLVGEGW
101: SPLFAVPEIQ EALQRAAVDS NSQVGSIFQV LRTKEMPPTF FRTNKFTTAF QEIVDAYGVA KYQEANPTVF TIVTFPFLFA VMFGDWGHGI CLLLATMYLI
201: LREKKLLSQL RAYFILNNFH CMV
101: SPLFAVPEIQ EALQRAAVDS NSQVGSIFQV LRTKEMPPTF FRTNKFTTAF QEIVDAYGVA KYQEANPTVF TIVTFPFLFA VMFGDWGHGI CLLLATMYLI
201: LREKKLLSQL RAYFILNNFH CMV
001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
Arabidopsis Description
VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.