Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011878.1-P | Field mustard | cytosol | 90.7 | 99.06 |
| CDY42603 | Canola | cytosol | 98.04 | 97.92 |
| CDX90307 | Canola | cytosol | 95.59 | 95.36 |
| CDY12118 | Canola | cytosol | 95.59 | 95.24 |
| AT4G39080.1 | Thale cress | cytosol, nucleus, plasma membrane | 93.02 | 92.57 |
| CDX82029 | Canola | cytosol | 88.74 | 88.31 |
| CDX99594 | Canola | cytosol | 88.86 | 88.21 |
| CDY15895 | Canola | cytosol | 88.37 | 88.16 |
| KRH24405 | Soybean | endoplasmic reticulum | 78.83 | 78.73 |
| KRH29384 | Soybean | endoplasmic reticulum | 78.7 | 78.61 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 79.07 | 78.59 |
| CDY61341 | Canola | cytosol | 27.42 | 78.32 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 76.25 | 77.97 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 77.97 | 77.68 |
| CDY71986 | Canola | cytosol | 20.07 | 73.54 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 19.83 | 70.74 |
| KRG89695 | Soybean | extracellular, mitochondrion | 5.51 | 69.23 |
| CDX80454 | Canola | extracellular | 5.88 | 67.61 |
| CDY15756 | Canola | cytosol | 61.08 | 62.45 |
| CDY53381 | Canola | cytosol | 61.08 | 62.45 |
| CDY04571 | Canola | cytosol | 60.34 | 62.09 |
| CDX83292 | Canola | cytosol | 62.42 | 61.97 |
| CDX77187 | Canola | cytosol | 59.98 | 61.71 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 62.18 | 59.76 |
| CDX83291 | Canola | cytosol | 10.65 | 47.8 |
| CDX89488 | Canola | cytosol | 7.71 | 47.01 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078HZ05 | UniProt:A0A078HZ05 | EnsemblPlants:CDY41958 | ProteinID:CDY41958 | ProteinID:CDY41958.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00073949001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix |
| UniParc:UPI0004EED12F | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaA01g05300DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078HZ05]
Coordinates
chrLK032511:+:79032..83933
Molecular Weight (calculated)
92324.1 Da
IEP (calculated)
5.842
GRAVY (calculated)
0.071
Length
817 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESGGCCPP MDLMRSEPMQ LVQLIVPMES AHLTVSYLGD LGLVQFKDLN SEKSPFQRTY AAQIKRCGEM ARKIRFFKDQ MSKAGVLPKD SLENGTDIDL
101: DDVEVKLGEL EAELVEINAN NDKLQRSYNE LIEYKLVLEK AGEFFSSAHT SATAQQREID SQQVGEDLLE APLLQEDKSI DSSKQVKLGF LTGLVPREKS
201: MVFERILFRA TRGNVFIRQT VIEEPVIDPN SGDKAEKNVF VVFYSGERAK SKILKICEAF GANRYPFSED LGKQAQMITE VSGRLTELKT TIDAGLGHRN
301: ILLHAIGDKF ELWNLKVRKE KAIYHTLNML SLDVTKKCLV AEGWSPVFAS NEIQNALKRA AVDSNSQVGS IFQVLRTKEL PPTYFRTNKF TSAIQEIVDA
401: YGVAKYQEAN PGVFTIVTFP FLFAVMFGDW GHGICLLLAT MYLIVREKKL SSQKLGDIME MAFGGRYVIM MMSLFSIYTG LIYNEFFSIP YPLFAPSAYD
501: CRDASCSEAT TIGLIKVRDT YPFGLDPVWH GTRSELPFLN SLKMKMSILL GVSQMNLGII MSYFNARFFK SSVNIWFQFI PQMIFLNSLF GYLSVLIIIK
601: WCTGSQADLY HVMIYMFLSP TDELGENQLF PHQKTVQLVL LFLALVSVPC MLLPKPFILK KQHEARHQGQ SYAPLEETDE SLHVEASGGS HGHEEFEFSE
701: IFVHQLIHTI EFVLGAVSNT ASYLRLWALS LAHSELSSVF YEKVLLLAWG YNNWLILIVG IIVFVFATVG VLLVMETLSA FLHALRLHWV EFQNKFYEGD
801: GYKFAPFSFI LTASEDE
101: DDVEVKLGEL EAELVEINAN NDKLQRSYNE LIEYKLVLEK AGEFFSSAHT SATAQQREID SQQVGEDLLE APLLQEDKSI DSSKQVKLGF LTGLVPREKS
201: MVFERILFRA TRGNVFIRQT VIEEPVIDPN SGDKAEKNVF VVFYSGERAK SKILKICEAF GANRYPFSED LGKQAQMITE VSGRLTELKT TIDAGLGHRN
301: ILLHAIGDKF ELWNLKVRKE KAIYHTLNML SLDVTKKCLV AEGWSPVFAS NEIQNALKRA AVDSNSQVGS IFQVLRTKEL PPTYFRTNKF TSAIQEIVDA
401: YGVAKYQEAN PGVFTIVTFP FLFAVMFGDW GHGICLLLAT MYLIVREKKL SSQKLGDIME MAFGGRYVIM MMSLFSIYTG LIYNEFFSIP YPLFAPSAYD
501: CRDASCSEAT TIGLIKVRDT YPFGLDPVWH GTRSELPFLN SLKMKMSILL GVSQMNLGII MSYFNARFFK SSVNIWFQFI PQMIFLNSLF GYLSVLIIIK
601: WCTGSQADLY HVMIYMFLSP TDELGENQLF PHQKTVQLVL LFLALVSVPC MLLPKPFILK KQHEARHQGQ SYAPLEETDE SLHVEASGGS HGHEEFEFSE
701: IFVHQLIHTI EFVLGAVSNT ASYLRLWALS LAHSELSSVF YEKVLLLAWG YNNWLILIVG IIVFVFATVG VLLVMETLSA FLHALRLHWV EFQNKFYEGD
801: GYKFAPFSFI LTASEDE
001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
Arabidopsis Description
VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.