Factsheet for Bra011878.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41958	Canola	cytosol	99.06	90.7
Bra010712.1-P	Field mustard	cytosol	94.52	86.32
AT4G39080.1	Thale cress	cytosol, nucleus, plasma membrane	92.38	84.17
Bra031187.1-P	Field mustard	cytosol	89.04	81.12
Os10t0184300-01	Rice	plasma membrane	11.36	80.95
Bra030300.1-P	Field mustard	cytosol	87.97	80.44
VIT_03s0038g00290.t01	Wine grape	cytosol	78.74	71.65
KRH24405	Soybean	endoplasmic reticulum	77.94	71.27
KRH29384	Soybean	endoplasmic reticulum	77.81	71.15
Solyc01g110120.2.1	Tomato	nucleus, plastid	77.94	71.1
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	75.94	70.3
Zm00001d047910_P001	Maize	plasma membrane	75.94	69.27
EER95168	Sorghum	cytosol	75.67	68.86
Os03t0251500-01	Rice	plasma membrane	74.87	68.29
Zm00001d028436_P001	Maize	mitochondrion, plastid	75.0	68.25
TraesCS4D01G223300.2	Wheat	cytosol	74.2	67.6
TraesCS4A01G081100.1	Wheat	cytosol	74.06	67.48
TraesCS4B01G222700.3	Wheat	cytosol	74.2	67.11
HORVU2Hr1G109990.2	Barley	vacuole	70.59	64.47
TraesCS2B01G520900.1	Wheat	cytosol	70.32	64.22
TraesCS2D01G493000.1	Wheat	cytosol	69.92	63.86
TraesCS2A01G492800.1	Wheat	cytosol	69.52	63.49
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	73.66	59.44
Bra011941.1-P	Field mustard	cytosol	60.03	54.69
Bra035693.1-P	Field mustard	cytosol	59.63	54.39
KRG89695	Soybean	extracellular, mitochondrion	4.55	52.31
Bra000490.1-P	Field mustard	cytosol	58.42	45.76

Protein Annotations

MapMan:24.1.1.1.1	EnsemblPlantsGene:Bra011878	EnsemblPlants:Bra011878.1	EnsemblPlants:Bra011878.1-P	ncoils:Coil	GO:GO:0000220
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	UniProt:M4D5X1	PFAM:PF01496
PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	TMHMM:TMhelix	UniParc:UPI0002545E7E	InterPro:V-ATPase_116kDa_su
InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:	:	:	:

Description

AT4G39080 (E=1e-267) VHA-A3 | VHA-A3 (VACUOLAR PROTON ATPASE A3); ATPase

Coordinates

chrA01:+:114814..119500

Molecular Weight (calculated)

84622.5 Da

IEP (calculated)

5.638

GRAVY (calculated)

0.041

Length

748 amino acids

Sequence
(BLAST)

001: MGESGGCCPP MDLMRSEPMQ LVQLIVPMES AHLTVSYLGD LGLVQFKDLN SEKSPFQRTY AAQIKRCGEM ARKIRFFKDQ MSKAGVLRKD SLENGTDIDL
101: DDVDVKLGEL EAELVEINAN NDKLQRSYNE LMEYKLVLEK AGEFFSSAHT SATAQQREID SQQVGEDLLE APLLQEDKSI DSSKQVKLGF LTGLVPREKS
201: MVFERILFRA TRGNVFIRQT VIEEPVIDPN SGDKAEKNVF VVFYSGERAK SKILKICEAF GANRYPFSED LGKQAQMITE VSGRLTELKT TIDAGLGHRN
301: ILLHAIGDKF ELWNLKVRKE KAIYHTLNML SLDVTKKCLV AEGWSPVFAS NEIQNALKRA AVDSNSQVGS IFQVLRTKEL SPTYFRTNKF TSAIQEIVDA
401: YGVAKYQEAN PGVFTIVTFP FLFAVMFGDW GHGICLLLAT MYLIVREKKL SSQKLGDIME MAFGGRYVIM MMSLFSIYTG LIYNEFFSIP YPLFAPSAYD
501: CRDASCRFQF IPQMIFLNSL FGYLSVLIII KWCTGSQADL YHVMIYMFLS PTDELGENQL FPHQKTVQLV LLFLALVSVP CMLLPKPFIL KKQHEARHQG
601: QSYAPLEETD ESLHVEASGG SHGHEEFEFS EIFVHQLIHT IEFVLGAVSN TASYLRLWAL SLAHSELSSV FYEKVLLLAW GYNNWLILIV GIIVFIFATV
701: GVLLVMETLS AFLHALRLHW VEFQNKFYEG DGYKFAPFSF ILTANEDE

Best Arabidopsis Sequence Match ( AT4G39080.1 )
(BLAST)

001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E

Arabidopsis Description

VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.