Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G081100.1 | Wheat | cytosol | 99.51 | 99.51 |
| TraesCS4B01G222700.3 | Wheat | cytosol | 99.76 | 99.03 |
| HORVU4Hr1G062880.3 | Barley | plasma membrane, vacuole | 98.05 | 86.84 |
| Zm00001d047910_P001 | Maize | plasma membrane | 86.36 | 86.46 |
| EER95168 | Sorghum | cytosol | 86.48 | 86.37 |
| Os03t0251500-01 | Rice | plasma membrane | 86.11 | 86.22 |
| Zm00001d028436_P001 | Maize | mitochondrion, plastid | 85.87 | 85.77 |
| GSMUA_Achr5P18710_001 | Banana | cytosol, extracellular | 77.47 | 78.71 |
| TraesCS2D01G493000.1 | Wheat | cytosol | 77.95 | 78.14 |
| AT4G39080.1 | Thale cress | cytosol, nucleus, plasma membrane | 76.25 | 76.25 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 75.64 | 75.73 |
| Bra010712.1-P | Field mustard | cytosol | 75.4 | 75.58 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 75.27 | 75.18 |
| AT2G21410.1 | Thale cress | cytosol | 74.3 | 74.3 |
| Bra030300.1-P | Field mustard | cytosol | 73.93 | 74.21 |
| Bra011878.1-P | Field mustard | cytosol | 67.6 | 74.2 |
| VIT_18s0001g13410.t01 | Wine grape | cytosol | 72.72 | 73.89 |
| KRH24405 | Soybean | endoplasmic reticulum | 73.57 | 73.84 |
| Bra031187.1-P | Field mustard | cytosol | 73.81 | 73.81 |
| Solyc07g032080.2.1 | Tomato | plastid | 73.45 | 73.72 |
| PGSC0003DMT400071849 | Potato | cytosol | 73.45 | 73.72 |
| KRH29384 | Soybean | endoplasmic reticulum | 73.08 | 73.35 |
| KRH51766 | Soybean | endoplasmic reticulum | 72.35 | 72.88 |
| KRG89695 | Soybean | extracellular, mitochondrion | 5.6 | 70.77 |
| KRH61086 | Soybean | cytosol, mitochondrion | 58.1 | 70.04 |
| CDX80454 | Canola | extracellular | 5.36 | 61.97 |
| TraesCS3D01G346900.1 | Wheat | golgi, unclear | 60.29 | 60.59 |
| CDX89488 | Canola | cytosol | 6.82 | 41.79 |
Protein Annotations
| MapMan:24.1.1.1.1 | ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0033179 | PFAM:PF01496 | PIRSF:PIRSF001293 |
| PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G223300 | EnsemblPlants:TraesCS4D01G223300.2 | InterPro:V-ATPase_116kDa_su |
| InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:380248684..380255315
Molecular Weight (calculated)
93067.5 Da
IEP (calculated)
5.955
GRAVY (calculated)
-0.010
Length
821 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSGGGCCP SMDLMRSEAM QLLQVIIPTE SAHLAVSHLG DLGLIQFKDL NADKSPFQRT YAAQIKRCAE MARKLRFFKE QMSKAGILVS PMQSTETPLD
101: FDDMEVKLGE LEAELTEVNA NDEKLQRAHN ELLEYSTVLQ KAGEFFYSAQ RSAAAQHRQM EANQSGETSL ESPLLEQDML TDASKQVKLG SLSGLVPKEK
201: AMAFERILFR ATRGNILLRQ ESVDEPVTDP QSGEKVYKNT FVVFYSGERA KAKILKICDA FRANRYPFPE DLAKQTHTVQ EVSGKISELK ATIDMGLAHR
301: DSILKTIASE FEHWNHLAKK EKSIYHTLNM LSVDVTKKCL VGEGWSPVFA ANQIQDALQR ATLESKSQVG SIFQVLNTKE SPPTYFQTNK FTSAFQEIVD
401: AYGVAKYQEA NPGVYTIITF PFLFAVMFGD WGHGICILLA TLYLIIREKK FASQKLGDIM EMMFGGRYII MMMSIFSIYT GLIYNEFFSV PFELFAKSAY
501: ACRDSSCSDS TTEGLIKVRD TYPFGVDPVW HGSRSELPFL NSLKMKMSIL LGVSQMNLGI FMSYFNAKFF RNSVNIWYQF VPQLIFLNSL FGYLSMLIII
601: KWCTGSKADL YHVMIYMFLS PTDDMGENQL FPGQKTLQQV LLLLALVSVP WMLIPKPFFL KWEHERRHQG HQYAMLEGAD ESVVAELGEH NEESNHHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL STVFYDKVLL LTLGYNNIFI LAIGVVVFIC ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FSFALISEDE E
101: FDDMEVKLGE LEAELTEVNA NDEKLQRAHN ELLEYSTVLQ KAGEFFYSAQ RSAAAQHRQM EANQSGETSL ESPLLEQDML TDASKQVKLG SLSGLVPKEK
201: AMAFERILFR ATRGNILLRQ ESVDEPVTDP QSGEKVYKNT FVVFYSGERA KAKILKICDA FRANRYPFPE DLAKQTHTVQ EVSGKISELK ATIDMGLAHR
301: DSILKTIASE FEHWNHLAKK EKSIYHTLNM LSVDVTKKCL VGEGWSPVFA ANQIQDALQR ATLESKSQVG SIFQVLNTKE SPPTYFQTNK FTSAFQEIVD
401: AYGVAKYQEA NPGVYTIITF PFLFAVMFGD WGHGICILLA TLYLIIREKK FASQKLGDIM EMMFGGRYII MMMSIFSIYT GLIYNEFFSV PFELFAKSAY
501: ACRDSSCSDS TTEGLIKVRD TYPFGVDPVW HGSRSELPFL NSLKMKMSIL LGVSQMNLGI FMSYFNAKFF RNSVNIWYQF VPQLIFLNSL FGYLSMLIII
601: KWCTGSKADL YHVMIYMFLS PTDDMGENQL FPGQKTLQQV LLLLALVSVP WMLIPKPFFL KWEHERRHQG HQYAMLEGAD ESVVAELGEH NEESNHHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL STVFYDKVLL LTLGYNNIFI LAIGVVVFIC ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FSFALISEDE E
001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
Arabidopsis Description
VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.