Factsheet for GSMUA_Achr5P18710_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
extracellular 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0184300-01	Rice	plasma membrane	11.14	85.71
Zm00001d028436_P001	Maize	mitochondrion, plastid	82.05	80.66
EER95168	Sorghum	cytosol	81.44	80.05
Zm00001d047910_P001	Maize	plasma membrane	81.06	79.88
VIT_03s0038g00290.t01	Wine grape	cytosol	81.19	79.81
VIT_18s0001g13410.t01	Wine grape	cytosol	79.21	79.21
Os03t0251500-01	Rice	plasma membrane	79.46	78.29
Solyc07g032080.2.1	Tomato	plastid	78.47	77.51
TraesCS4D01G223300.2	Wheat	cytosol	78.71	77.47
TraesCS4A01G081100.1	Wheat	cytosol	78.47	77.22
TraesCS4B01G222700.3	Wheat	cytosol	78.84	77.03
PGSC0003DMT400071849	Potato	cytosol	77.97	77.02
Solyc01g110120.2.1	Tomato	nucleus, plastid	77.85	76.71
Bra010712.1-P	Field mustard	cytosol	76.98	75.95
Bra011878.1-P	Field mustard	cytosol	70.3	75.94
KRH24405	Soybean	endoplasmic reticulum	76.73	75.79
KRH51766	Soybean	endoplasmic reticulum	75.99	75.34
KRH29384	Soybean	endoplasmic reticulum	76.24	75.31
AT4G39080.1	Thale cress	cytosol, nucleus, plasma membrane	76.49	75.27
HORVU2Hr1G109990.2	Barley	vacuole	76.11	75.09
Bra030300.1-P	Field mustard	cytosol	75.74	74.82
TraesCS2B01G520900.1	Wheat	cytosol	75.74	74.73
TraesCS2D01G493000.1	Wheat	cytosol	75.37	74.36
Bra031187.1-P	Field mustard	cytosol	75.37	74.18
TraesCS2A01G492800.1	Wheat	cytosol	75.12	74.11
AT2G21410.1	Thale cress	cytosol	75.12	73.93
KRG89695	Soybean	extracellular, mitochondrion	5.94	73.85
KRH61086	Soybean	cytosol, mitochondrion	61.26	72.69
HORVU4Hr1G062880.3	Barley	plasma membrane, vacuole	77.72	67.75
GSMUA_Achr7P22660_001	Banana	cytosol	64.73	64.65
CDX80454	Canola	extracellular	4.7	53.52
CDX89488	Canola	cytosol	6.31	38.06

Protein Annotations

MapMan:24.1.1.1.1	ncoils:Coil	GO:GO:0000220	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0033179	EnsemblPlantsGene:GSMUA_Achr5G18710_001	EnsemblPlants:GSMUA_Achr5P18710_001	EnsemblPlants:GSMUA_Achr5T18710_001	UniProt:M0SZQ0	PFAM:PF01496
PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	TMHMM:TMhelix	UniParc:UPI000296C801	InterPro:V-ATPase_116kDa_su
InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:	:	:	:

Description

Putative Vacuolar proton translocating ATPase 100 kDa subunit [Source:GMGC_GENE;Acc:GSMUA_Achr5G18710_001]

Coordinates

chr5:+:20240805..20257435

Molecular Weight (calculated)

92258.1 Da

IEP (calculated)

5.736

GRAVY (calculated)

0.033

Length

808 amino acids

Sequence
(BLAST)

001: MDLMRSEAMQ LVRIIVPVES AHLTLSYLGD LGLFQFKDLN ADKSPFQRTY ANQIKRCGEM ARKLRLFKEQ MAKAGISHSE MAMTQTRIDF DEMEIKLGEL
101: EAELIEVNSN NEKLQRSYNE LLEYMLVLKK AGEFFYSAQS SATAQQREIE ARQTGDGSLD SPLLLEQEML TDPAKQVKLG FVSGLVPKEK AMAFERILFR
201: ATRGNMYLRQ AAVDDPVIDP ISGEKIAKNV FVVFYSGERA KTKILKICEA FGANRYPFTD DIGKQMQMIS EVSGKITELK TTIDLGMLHR DNILKNISYQ
301: FEQWNNLVRT EKAIYHTLNM LSLDVTKKCL VAEGWSPVFA TSQIQDALQR ATYDSNSQVG SIFQVLHTKE SPPTYFQTNK FTSAFQEIVD AYGIAKYQEA
401: NPGVYTIVTF PFLFAVMFGD WGHGMCLLLA TLMLIFREKK LSSQKLGDIM EMMFGGRYVI LMMALFSIYT GLIYNEFFSV PFEMFGRSAY ACRDLSCRDA
501: TTEGLVKVRE AYPFGVDPKW HGSRSELPFL NSLKMKMSIL LGVAQMNLGI ILSYFNAKFF SNSINTWYQF IPQLIFLNSL FGYLSLLIIV KWCTGSQADL
601: YHVMIYMFLS PTDDLGENQL FPGQKTLQLV LLLLALISVP WMLFPKPILL RKQHNERHQG QSYTMLHNTE ESLEIEEDHD SHDHEEFEFS EVFVHQLIHT
701: IEFVLGAVSN TASYLRLWAL SLAHSELSSV FYEKVLLLAW GFNNIAILII GIVVFVCATI GVLLVMETLS AFLHALRLHW VEFQNKFYEG DGYKFAPFSF
801: ALLTDEED

Best Arabidopsis Sequence Match ( AT4G39080.1 )
(BLAST)

001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E

Arabidopsis Description

VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.