Factsheet for Os10t0184300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
TargetP:	secretory
YLoc:	plasma membrane

plasma membrane: 18260611
plasma membrane: 18557835
vacuole: 18557835
plastid: 21433289

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89695	Soybean	extracellular, mitochondrion	10.48	16.92
Bra011878.1-P	Field mustard	cytosol	80.95	11.36
GSMUA_Achr5P18710_001	Banana	cytosol, extracellular	85.71	11.14
TraesCS2D01G493000.1	Wheat	cytosol	83.81	10.74
HORVU2Hr1G109990.2	Barley	vacuole	83.81	10.74
Os03t0251500-01	Rice	plasma membrane	83.81	10.73
KRH61086	Soybean	cytosol, mitochondrion	69.52	10.72
Solyc07g032080.2.1	Tomato	plastid	82.86	10.64
PGSC0003DMT400071849	Potato	cytosol	82.86	10.64
TraesCS2B01G520900.1	Wheat	cytosol	82.86	10.62
Solyc01g110120.2.1	Tomato	nucleus, plastid	82.86	10.61
VIT_03s0038g00290.t01	Wine grape	cytosol	82.86	10.58
VIT_18s0001g13410.t01	Wine grape	cytosol	80.95	10.52
TraesCS2A01G492800.1	Wheat	cytosol	81.9	10.5
Bra010712.1-P	Field mustard	cytosol	80.95	10.38
AT4G39080.1	Thale cress	cytosol, nucleus, plasma membrane	80.95	10.35
KRH29384	Soybean	endoplasmic reticulum	80.0	10.27
KRH24405	Soybean	endoplasmic reticulum	80.0	10.27
Bra031187.1-P	Field mustard	cytosol	78.1	9.99
AT2G21410.1	Thale cress	cytosol	78.1	9.99
Os01t0834200-01	Rice	cytosol	75.24	9.66
Bra030300.1-P	Field mustard	cytosol	75.24	9.66
KRH51766	Soybean	endoplasmic reticulum	74.29	9.57

Protein Annotations

MapMan:35.1	ProteinID:BAF26173.1	ProteinID:BAT10149.1	GO:GO:0000325	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006139	GO:GO:0006810	GO:GO:0006811	GO:GO:0007035
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986
GO:GO:0015991	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016471	GO:GO:0016787
GO:GO:0019725	GO:GO:0033179	GO:GO:0046961	GO:GO:0051117	GO:GO:0070072	EnsemblPlantsGene:Os10g0184300
EnsemblPlants:Os10t0184300-01	PFAM:PF01496	PANTHER:PTHR11629	PANTHER:PTHR11629:SF89	UniProt:Q0IYP2	TMHMM:TMhelix
UniParc:UPI0000DD9913	InterPro:V-ATPase_116kDa_su	:	:	:	:

Description

ATPase, V0/A0 complex, 116-kDa subunit family protein. (Os10t0184300-01);Non-protein coding transcript. (Os10t0184300-02)

Coordinates

chr10:+:5788473..5789339

Molecular Weight (calculated)

11910.5 Da

IEP (calculated)

4.676

GRAVY (calculated)

0.776

Length

105 amino acids

Sequence
(BLAST)

001: VLGAVSNTAS YLRLWALSLA HSELSTVFYE KVLVLSWGYN NIFILIIGAV IFLFATIGVL LVMETLSAFL HALRLHWVEF QNKFYEGDGY KFVPFAFASI
101: IEEED

Best Arabidopsis Sequence Match ( AT2G21410.1 )
(BLAST)

001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E

Arabidopsis Description

VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.