Factsheet for Bra000490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83291	Canola	cytosol	18.64	97.8
CDX83292	Canola	cytosol	82.62	95.87
CDY63878	Canola	cytosol, plasma membrane, plastid	82.51	92.71
Bra035693.1-P	Field mustard	cytosol	78.32	91.22
AT2G28520.1	Thale cress	cytosol	77.91	91.06
Bra011941.1-P	Field mustard	cytosol	77.8	90.5
VIT_06s0004g03450.t01	Wine grape	cytosol	67.64	78.97
KRH22944	Soybean	cytosol	66.6	77.56
KRH10401	Soybean	cytosol, endoplasmic reticulum	66.39	77.13
Solyc06g075400.2.1	Tomato	cytosol	65.65	76.65
PGSC0003DMT400065278	Potato	cytosol	65.65	76.56
PGSC0003DMT400019381	Potato	cytosol	65.55	76.53
KRH24948	Soybean	cytosol	65.44	76.41
Solyc11g072530.1.1	Tomato	cytosol	65.34	76.19
KRG89062	Soybean	cytosol, endoplasmic reticulum	65.24	76.16
GSMUA_Achr7P22660_001	Banana	cytosol	62.72	74.04
EES03840	Sorghum	cytosol	60.42	70.54
Zm00001d012446_P002	Maize	cytosol	59.9	69.93
TraesCS3B01G385500.1	Wheat	cytosol	59.37	69.4
TraesCS3D01G346900.1	Wheat	golgi, unclear	59.27	69.28
Os01t0834200-01	Rice	cytosol	59.27	69.19
TraesCS3A01G352800.1	Wheat	cytosol	58.85	68.79
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	16.23	65.96
VIT_13s0175g00200.t01	Wine grape	cytosol	12.25	60.94
Bra010712.1-P	Field mustard	cytosol	51.2	59.71
Bra030300.1-P	Field mustard	cytosol	50.58	59.05
Bra011878.1-P	Field mustard	cytosol	45.76	58.42
Bra031187.1-P	Field mustard	cytosol	50.16	58.34
KXG29301	Sorghum	cytosol	2.62	58.14
Zm00001d046282_P001	Maize	cytosol	8.59	56.55
Zm00001d040680_P001	Maize	mitochondrion	6.39	53.51

Protein Annotations

MapMan:24.1.1.1.1	EnsemblPlantsGene:Bra000490	EnsemblPlants:Bra000490.1	EnsemblPlants:Bra000490.1-P	ncoils:Coil	GO:GO:0000220
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	UniProt:M4C8G2	PFAM:PF01496
PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	TMHMM:TMhelix	UniParc:UPI000253FFB0	InterPro:V-ATPase_116kDa_su
InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:	:	:	:

Description

AT2G28520 (E=7e-296) VHA-A1 | VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase

Coordinates

chrA03:-:11369194..11375685

Molecular Weight (calculated)

110099.0 Da

IEP (calculated)

7.083

GRAVY (calculated)

-0.134

Length

955 amino acids

Sequence
(BLAST)

001: MGKTLMGNEG VWRLWIGEVW MGEAWTGEAW TEEEWTGETF MGMKVFGDCG WVRRGWVKRG RVHQLLTCCE KLSRKAVPRS SGYLRTTEWR RVCEERKEME
101: GETVKNLDLG CGREQKLNSD LRRETFQIRS ERVSESPSKK RREEMDDFLD KLPQMDLMRS EKMTLVQLII PVESAHRSVT YLGELGLLQF RDLNADKSPF
201: QRTFATQVST QRSLYFYYIR FQSAVVKRCG EMSRKLRFFK DQIDKAGLRC LQRHELEPNI ELGDLERQLA DHEHEVLEMN SNSEKLRQTY NELLEFKIVL
301: QKASGFLVSS NAHAIGDETE LHESTYSNNG FIESSLLEQE MRPEPLNQSG LRFISGIINK DKLLRFERML FRATRGNMLF NQTPSDEEIM DPSTSEMVEK
401: IVFVVFFSGE QARTKILKIC EAFGANCYPV PEDITKQRQL TREVLSRLSD LEATLDAGSR HRNNALNVVG YSLTKWMTTV RREKAVYDTL NMLNFDVTKK
501: CLVGEGWCPT FAKTQIHEVL QRATSDSNSQ VGVIFHVMHA VESPPTYFRT NKLTNAFQEI IDAYGVARYQ EANPAVYSVV TYPFLFAVMF GDWGHGLCLL
601: LGALYLLARE RKLSKQKLGS FMEMLFGGRY VILLMALFSI YCGLIYNEFF SVPFHIFGGS AYKCRDTTCS DAYTAGLVKY RDPYPFGVDP SWRGSRSELP
701: YLNSLKMKMS ILLGIAQMNL GLILSFFNAR FFGSSLDIRY QFIPQMIFLN SLFGYLSLLI IIKWCTGSQA DLYHILLLLL AFIAVPWMLF PKPFALRKIH
801: MERFQGRTYG LLGTSEVDLD VDPDSARSHQ EEEFNFSEIF VHQLIHSIEF VLGSVSNTAS YLRLWALSLA HSELSTVFYE KVLLLAWGYE NILIRLIGVV
901: VFAFATAFIL LMMETLSAFL HALRLHWVEF MGKFFHGDGY KFKPFSFTLI SDDDE

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.