Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G346900.1 | Wheat | golgi, unclear | 98.16 | 98.16 |
TraesCS3B01G385500.1 | Wheat | cytosol | 98.16 | 98.16 |
Os01t0834200-01 | Rice | cytosol | 89.23 | 89.12 |
EES03840 | Sorghum | cytosol | 89.11 | 89.0 |
Zm00001d012446_P002 | Maize | cytosol | 88.62 | 88.51 |
Zm00001d042969_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.85 | 86.38 |
KXG29301 | Sorghum | cytosol | 4.16 | 79.07 |
GSMUA_Achr7P22660_001 | Banana | cytosol | 77.48 | 78.24 |
Zm00001d046282_P001 | Maize | cytosol | 13.59 | 76.55 |
Zm00001d040680_P001 | Maize | mitochondrion | 10.65 | 76.32 |
Solyc11g072530.1.1 | Tomato | cytosol | 73.07 | 72.89 |
PGSC0003DMT400065278 | Potato | cytosol | 72.83 | 72.65 |
KRH22944 | Soybean | cytosol | 72.7 | 72.44 |
KRH10401 | Soybean | cytosol, endoplasmic reticulum | 72.7 | 72.26 |
KRH24948 | Soybean | cytosol | 72.34 | 72.25 |
Solyc06g075400.2.1 | Tomato | cytosol | 72.34 | 72.25 |
PGSC0003DMT400019381 | Potato | cytosol | 72.09 | 72.0 |
KRG89062 | Soybean | cytosol, endoplasmic reticulum | 71.36 | 71.27 |
CDY04571 | Canola | cytosol | 68.91 | 70.91 |
CDY15756 | Canola | cytosol | 69.28 | 70.84 |
CDX83292 | Canola | cytosol | 71.11 | 70.6 |
AT2G28520.1 | Thale cress | cytosol | 70.5 | 70.5 |
CDX77187 | Canola | cytosol | 68.3 | 70.28 |
CDY53381 | Canola | cytosol | 68.54 | 70.09 |
Bra011941.1-P | Field mustard | cytosol | 69.52 | 69.18 |
Bra035693.1-P | Field mustard | cytosol | 68.54 | 68.29 |
CDY63878 | Canola | cytosol, plasma membrane, plastid | 70.99 | 68.24 |
TraesCS4A01G081100.1 | Wheat | cytosol | 60.59 | 60.29 |
Bra000490.1-P | Field mustard | cytosol | 68.79 | 58.85 |
TraesCS2A01G492800.1 | Wheat | cytosol | 58.26 | 58.12 |
CDX83291 | Canola | cytosol | 12.85 | 57.69 |
VIT_13s0175g00190.t01 | Wine grape | extracellular | 4.16 | 53.97 |
Protein Annotations
MapMan:24.1.1.1.1 | ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0033179 | PFAM:PF01496 | PIRSF:PIRSF001293 |
PANTHER:PTHR11629 | PANTHER:PTHR11629:SF72 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G352800 | EnsemblPlants:TraesCS3A01G352800.1 | InterPro:V-ATPase_116kDa_su |
InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:600914477..600924548
Molecular Weight (calculated)
92847.6 Da
IEP (calculated)
6.140
GRAVY (calculated)
0.059
Length
817 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFDRLPPM DHLRSEKMCL VQLIFPAESA RLAVTYLGEL GLLQFKDLNE DKSPFQRIFV NQVKRCAEMT RKLKFFSDQI NKAGVKSSVR PALQPEIDLE
101: ELEAKLGEHE HELLEMNTNS GTLRQTYNEL LEFKLVLSKA GSILAASQNH ATPADHELDE HIYDKEVDEG NGYLLEQGIQ QGASESGVRF VSGIILKSKA
201: LAFERMLFRT TRGNLFFNQA SAGEPVMDPS SGEEVEKTVF VVFFSGEQAK AIILRICASF GANCYPVPEE TVKQRQILRE VSSRLGDLEV TLDAGIQHRN
301: KALESVGSQL WRWILMVKKE KAVYDTLNML NFDVTKKCLV GEGWCPIFAK SQIEDVLQRA TLHSNSQVGI IFHEMDTIDS PPTYFRTDKF TNAFQEIVDA
401: YGVGRYEEIN PAVYSVITFP FLFAVMFGDW GHGICLLIGA LILILREKKL SSQKLDSFTE MAFGGRYVIL LMALFSIYCG LIYNEFFSVP FHIFGKSAYA
501: CRENSCSDAY TAGLVKVRDP YPFGVDPSWR GSRSELPFLN SLKMKMSILM GVSQMNLGIL LSYFDAKFHK NALDIRYQFI PQLIFLNSLF GYLSLLILIK
601: WCTGSKADLY HVMIYMFLDP AGDLGENQLF WGQKELQILL LLLALVAVPW MLFPKPFILK KLHKERFQGH SYRFLGTSEM DPDSEPDSAR SRHDDFNFGE
701: VFVHQMIHSI EFVLGAVSNT ASYLRLWALS LAHSELSTVF YEKLLLFAWG YDSLIFKVVG LIVFAFATAF ILLGMESLSA FLHALRLHWV EFMNKFYHGD
801: GYKFKPFSFA LLADDEE
101: ELEAKLGEHE HELLEMNTNS GTLRQTYNEL LEFKLVLSKA GSILAASQNH ATPADHELDE HIYDKEVDEG NGYLLEQGIQ QGASESGVRF VSGIILKSKA
201: LAFERMLFRT TRGNLFFNQA SAGEPVMDPS SGEEVEKTVF VVFFSGEQAK AIILRICASF GANCYPVPEE TVKQRQILRE VSSRLGDLEV TLDAGIQHRN
301: KALESVGSQL WRWILMVKKE KAVYDTLNML NFDVTKKCLV GEGWCPIFAK SQIEDVLQRA TLHSNSQVGI IFHEMDTIDS PPTYFRTDKF TNAFQEIVDA
401: YGVGRYEEIN PAVYSVITFP FLFAVMFGDW GHGICLLIGA LILILREKKL SSQKLDSFTE MAFGGRYVIL LMALFSIYCG LIYNEFFSVP FHIFGKSAYA
501: CRENSCSDAY TAGLVKVRDP YPFGVDPSWR GSRSELPFLN SLKMKMSILM GVSQMNLGIL LSYFDAKFHK NALDIRYQFI PQLIFLNSLF GYLSLLILIK
601: WCTGSKADLY HVMIYMFLDP AGDLGENQLF WGQKELQILL LLLALVAVPW MLFPKPFILK KLHKERFQGH SYRFLGTSEM DPDSEPDSAR SRHDDFNFGE
701: VFVHQMIHSI EFVLGAVSNT ASYLRLWALS LAHSELSTVF YEKLLLFAWG YDSLIFKVVG LIVFAFATAF ILLGMESLSA FLHALRLHWV EFMNKFYHGD
801: GYKFKPFSFA LLADDEE
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Arabidopsis Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.