Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065278 | Potato | cytosol | 99.15 | 99.15 |
| Solyc06g075400.2.1 | Tomato | cytosol | 89.01 | 89.12 |
| VIT_06s0004g03450.t01 | Wine grape | cytosol | 85.84 | 85.94 |
| KRH22944 | Soybean | cytosol | 83.39 | 83.29 |
| KRH10401 | Soybean | cytosol, endoplasmic reticulum | 82.91 | 82.6 |
| KRH24948 | Soybean | cytosol | 82.05 | 82.15 |
| KRG89062 | Soybean | cytosol, endoplasmic reticulum | 82.05 | 82.15 |
| CDY15756 | Canola | cytosol | 77.17 | 79.1 |
| CDY04571 | Canola | cytosol | 76.56 | 78.97 |
| AT2G28520.1 | Thale cress | cytosol | 78.63 | 78.83 |
| CDY53381 | Canola | cytosol | 76.8 | 78.72 |
| Zm00001d042969_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 22.59 | 78.72 |
| CDX83292 | Canola | cytosol | 78.51 | 78.13 |
| CDX77187 | Canola | cytosol | 75.7 | 78.09 |
| Bra011941.1-P | Field mustard | cytosol | 77.41 | 77.22 |
| Bra035693.1-P | Field mustard | cytosol | 76.8 | 76.71 |
| GSMUA_Achr7P22660_001 | Banana | cytosol | 75.7 | 76.64 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 78.63 | 75.76 |
| EES03840 | Sorghum | cytosol | 75.34 | 75.43 |
| Zm00001d012446_P002 | Maize | cytosol | 74.85 | 74.94 |
| Os01t0834200-01 | Rice | cytosol | 73.75 | 73.84 |
| TraesCS3B01G385500.1 | Wheat | cytosol | 73.26 | 73.44 |
| TraesCS3D01G346900.1 | Wheat | golgi, unclear | 73.26 | 73.44 |
| TraesCS3A01G352800.1 | Wheat | cytosol | 72.89 | 73.07 |
| CDX83291 | Canola | cytosol | 15.26 | 68.68 |
| Bra000490.1-P | Field mustard | cytosol | 76.19 | 65.34 |
| Solyc07g032080.2.1 | Tomato | plastid | 63.74 | 63.81 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 63.74 | 63.66 |
| KXG29301 | Sorghum | cytosol | 3.3 | 62.79 |
| VIT_13s0175g00200.t01 | Wine grape | cytosol | 14.41 | 61.46 |
| Zm00001d046282_P001 | Maize | cytosol | 10.74 | 60.69 |
| Zm00001d040680_P001 | Maize | mitochondrion | 7.94 | 57.02 |
Protein Annotations
| MapMan:24.1.1.1.1 | ncoils:Coil | GO:GO:0000220 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006139 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007035 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015986 |
| GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016471 |
| GO:GO:0016787 | GO:GO:0019725 | GO:GO:0033179 | GO:GO:0046961 | GO:GO:0051117 | GO:GO:0070072 |
| UniProt:K4DAW0 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF72 | EnsemblPlantsGene:Solyc11g072530.1 |
| EnsemblPlants:Solyc11g072530.1.1 | TMHMM:TMhelix | UniParc:UPI0002769CB8 | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg |
Description
V-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:K4DAW0]
Coordinates
chr11:+:55717654..55727718
Molecular Weight (calculated)
93656.5 Da
IEP (calculated)
5.896
GRAVY (calculated)
0.062
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYIDNLPPM DLMRSEKMTF VQLIIPVESA HPAITYLGQL GLLQFRDLNA DKSPFQRTFV NQVKRCAEMS RKLRFFKDQI QKAGMLPSPR PASQPDIELE
101: ELEIQLAEHE HELIEMNGNS DKLRQSYNEL LEFKMVLQKA SDFLVSSRSH TTAQETELSE NVYSNDNYTD TASLLEQEMQ PELSNQSGVR FISGIICKSK
201: VLQFERMLFR ATRGNMLFHQ GVADEEILDP SSNEMVEKIV FVVFFSGEQA RSKILKICEA FGANCYPVPE DMTKRRQITR EVVSRLSELE TTLDVGLRHR
301: DKALTSIGFH LTKWMNMVRR EKAVYDTLNM LNFDVTKKCL VGEGWCPIFA KIKIQEALQR ATMDSNSQVG IIFHVMDTVD SPPTYFRTNC FTNAYQEIVD
401: AYGVAKYQEV NPAVYTIVTF PFLFAVMFGD WGHGICLLLG ALVLISKESK LSSQKLGSFM EMLFGGRYVL LLMSIFSIYC GLIYNEFFSV PFHIFGGSAY
501: KCRDASCSDA QTVGLIKYSD PYPFGVDPSW RGSRSELPFL NSLKMKMSIL LGVVQMNLGI ILSYFNARFF NSSLDIKYQF VPQVIFLNSL FGYLSLLVVV
601: KWCTGSQADL YHVMIYMFLS PFEALGENQL FWGQSVLQVI LLLLALVAVP WMLFPKPFIL KRLHTERFQG GTYGLLGTSE LDIYEEPDSA RQHHHEEFNF
701: SEVFVHQMIH SIEFVLGAVS NTASYLRLWA LSLAHSELST VFYEKVLLLA WGYDSLVIRL IGLSVFAFAT TFILLMMETL SAFLHALRLH WVEFQNKFYH
801: GDGYKFNPFS FASLADDDD
101: ELEIQLAEHE HELIEMNGNS DKLRQSYNEL LEFKMVLQKA SDFLVSSRSH TTAQETELSE NVYSNDNYTD TASLLEQEMQ PELSNQSGVR FISGIICKSK
201: VLQFERMLFR ATRGNMLFHQ GVADEEILDP SSNEMVEKIV FVVFFSGEQA RSKILKICEA FGANCYPVPE DMTKRRQITR EVVSRLSELE TTLDVGLRHR
301: DKALTSIGFH LTKWMNMVRR EKAVYDTLNM LNFDVTKKCL VGEGWCPIFA KIKIQEALQR ATMDSNSQVG IIFHVMDTVD SPPTYFRTNC FTNAYQEIVD
401: AYGVAKYQEV NPAVYTIVTF PFLFAVMFGD WGHGICLLLG ALVLISKESK LSSQKLGSFM EMLFGGRYVL LLMSIFSIYC GLIYNEFFSV PFHIFGGSAY
501: KCRDASCSDA QTVGLIKYSD PYPFGVDPSW RGSRSELPFL NSLKMKMSIL LGVVQMNLGI ILSYFNARFF NSSLDIKYQF VPQVIFLNSL FGYLSLLVVV
601: KWCTGSQADL YHVMIYMFLS PFEALGENQL FWGQSVLQVI LLLLALVAVP WMLFPKPFIL KRLHTERFQG GTYGLLGTSE LDIYEEPDSA RQHHHEEFNF
701: SEVFVHQMIH SIEFVLGAVS NTASYLRLWA LSLAHSELST VFYEKVLLLA WGYDSLVIRL IGLSVFAFAT TFILLMMETL SAFLHALRLH WVEFQNKFYH
801: GDGYKFNPFS FASLADDDD
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Arabidopsis Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.