Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G346900.1 | Wheat | golgi, unclear | 99.63 | 99.63 |
| TraesCS3A01G352800.1 | Wheat | cytosol | 98.16 | 98.16 |
| Os01t0834200-01 | Rice | cytosol | 89.72 | 89.61 |
| EES03840 | Sorghum | cytosol | 89.23 | 89.12 |
| Zm00001d012446_P002 | Maize | cytosol | 88.62 | 88.51 |
| Zm00001d042969_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.85 | 86.38 |
| KXG29301 | Sorghum | cytosol | 4.16 | 79.07 |
| GSMUA_Achr7P22660_001 | Banana | cytosol | 77.72 | 78.49 |
| Zm00001d046282_P001 | Maize | cytosol | 13.59 | 76.55 |
| Zm00001d040680_P001 | Maize | mitochondrion | 10.65 | 76.32 |
| Solyc11g072530.1.1 | Tomato | cytosol | 73.44 | 73.26 |
| KRH22944 | Soybean | cytosol | 73.32 | 73.05 |
| PGSC0003DMT400065278 | Potato | cytosol | 73.19 | 73.02 |
| KRH24948 | Soybean | cytosol | 72.95 | 72.86 |
| KRH10401 | Soybean | cytosol, endoplasmic reticulum | 73.19 | 72.75 |
| Solyc06g075400.2.1 | Tomato | cytosol | 72.58 | 72.49 |
| PGSC0003DMT400019381 | Potato | cytosol | 72.34 | 72.25 |
| KRG89062 | Soybean | cytosol, endoplasmic reticulum | 71.73 | 71.64 |
| CDY04571 | Canola | cytosol | 69.4 | 71.41 |
| CDY15756 | Canola | cytosol | 69.77 | 71.34 |
| CDX83292 | Canola | cytosol | 71.73 | 71.2 |
| AT2G28520.1 | Thale cress | cytosol | 70.99 | 70.99 |
| CDX77187 | Canola | cytosol | 68.79 | 70.78 |
| CDY53381 | Canola | cytosol | 69.03 | 70.59 |
| Bra011941.1-P | Field mustard | cytosol | 70.01 | 69.67 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 71.6 | 68.82 |
| Bra035693.1-P | Field mustard | cytosol | 69.03 | 68.78 |
| TraesCS4B01G222700.3 | Wheat | cytosol | 60.59 | 59.85 |
| Bra000490.1-P | Field mustard | cytosol | 69.4 | 59.37 |
| TraesCS2B01G520900.1 | Wheat | cytosol | 58.51 | 58.36 |
| CDX83291 | Canola | cytosol | 12.85 | 57.69 |
| VIT_13s0175g00190.t01 | Wine grape | extracellular | 4.04 | 52.38 |
Protein Annotations
| MapMan:24.1.1.1.1 | ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0016020 | GO:GO:0033179 | PFAM:PF01496 | PIRSF:PIRSF001293 |
| PANTHER:PTHR11629 | PANTHER:PTHR11629:SF72 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G385500 | EnsemblPlants:TraesCS3B01G385500.1 | InterPro:V-ATPase_116kDa_su |
| InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:605655549..605665005
Molecular Weight (calculated)
92987.6 Da
IEP (calculated)
6.141
GRAVY (calculated)
0.032
Length
817 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFDRLPPM DHLRSEKMCL VQLIFPAESA RLAVTYLGEL GLLQFKDLNE DKSPFQRIFV NQVKRCAEMN RKLKFFSDQI NKAGVKSSVR PALQPEIDLE
101: ELEAKLGEHE HELLEMNTNS GTLRQTYNEL LEFKLVLSKA GSILAASQNH ATPADHELDE HIYDKEVDDG NGYLLEQGIY QGASESGVRF VSGIILKSKA
201: LAFERMLFRT TRGNMFFNEA SAGEPVMDPS SGEEVEKTVF VVFFSGEQAK AKILRICASF GANCYPVPEE IVKQRQIFRE VSSRLSDLEA TLDAGTQHRN
301: KALESVGSQL WRWILMVKKE KAVYDTLNML NFDVTKKCLV GEGWCPIFAK SQIEDVLQRA TLHSNSQVGI IFHEMDTIDS PPTYFRTDKF TNAFQEIVDA
401: YGVGRYEEIN PAVYSVITFP FLFAVMFGDW GHGICLLLGA LFLILREKKL SSQKLDSFTE MAFGGRYVIL LMALFSIYCG LIYNEFFSVP FHIFGKSAYA
501: CRENSCSDAY TAGLVKVRDP YPFGVDPSWR GSRSELPFLN SLKMKMSILM GVSQMNLGIL LSYFDAKFHK NALDIRYQFI PQLIFLNSLF GYLSLLILIK
601: WCTGSKADLY HVMIYMFLDP AGDLGENQLF WGQKELQILL LLLALVAVPW MLFPKPFILK KLHKERFQGH SYRFLGTSEM DPDSEPDSAR SRHDDFNFGE
701: VFVHQMIHSI EFVLGAVSNT ASYLRLWALS LAHSELSTVF YEKLLLFAWG YDSLIFKLVG LIVFAFATAF ILLGMESLSA FLHALRLHWV EFMNKFYHGD
801: GYKFKPFSFA TLADDEE
101: ELEAKLGEHE HELLEMNTNS GTLRQTYNEL LEFKLVLSKA GSILAASQNH ATPADHELDE HIYDKEVDDG NGYLLEQGIY QGASESGVRF VSGIILKSKA
201: LAFERMLFRT TRGNMFFNEA SAGEPVMDPS SGEEVEKTVF VVFFSGEQAK AKILRICASF GANCYPVPEE IVKQRQIFRE VSSRLSDLEA TLDAGTQHRN
301: KALESVGSQL WRWILMVKKE KAVYDTLNML NFDVTKKCLV GEGWCPIFAK SQIEDVLQRA TLHSNSQVGI IFHEMDTIDS PPTYFRTDKF TNAFQEIVDA
401: YGVGRYEEIN PAVYSVITFP FLFAVMFGDW GHGICLLLGA LFLILREKKL SSQKLDSFTE MAFGGRYVIL LMALFSIYCG LIYNEFFSVP FHIFGKSAYA
501: CRENSCSDAY TAGLVKVRDP YPFGVDPSWR GSRSELPFLN SLKMKMSILM GVSQMNLGIL LSYFDAKFHK NALDIRYQFI PQLIFLNSLF GYLSLLILIK
601: WCTGSKADLY HVMIYMFLDP AGDLGENQLF WGQKELQILL LLLALVAVPW MLFPKPFILK KLHKERFQGH SYRFLGTSEM DPDSEPDSAR SRHDDFNFGE
701: VFVHQMIHSI EFVLGAVSNT ASYLRLWALS LAHSELSTVF YEKLLLFAWG YDSLIFKLVG LIVFAFATAF ILLGMESLSA FLHALRLHWV EFMNKFYHGD
801: GYKFKPFSFA TLADDEE
001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI
Arabidopsis Description
VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.