Factsheet for Bra035693.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53381	Canola	cytosol	96.1	98.62
Bra011941.1-P	Field mustard	cytosol	96.22	96.1
AT2G28520.1	Thale cress	cytosol	92.07	92.41
VIT_06s0004g03450.t01	Wine grape	cytosol	79.39	79.58
Bra000490.1-P	Field mustard	cytosol	91.22	78.32
KRH22944	Soybean	cytosol	77.93	77.93
Solyc06g075400.2.1	Tomato	cytosol	77.2	77.38
KRH10401	Soybean	cytosol, endoplasmic reticulum	77.56	77.37
KRH24948	Soybean	cytosol	77.07	77.26
PGSC0003DMT400019381	Potato	cytosol	77.07	77.26
PGSC0003DMT400065278	Potato	cytosol	77.07	77.17
KRG89062	Soybean	cytosol, endoplasmic reticulum	76.83	77.02
Solyc11g072530.1.1	Tomato	cytosol	76.71	76.8
GSMUA_Achr7P22660_001	Banana	cytosol	72.68	73.67
EES03840	Sorghum	cytosol	70.24	70.42
Zm00001d012446_P002	Maize	cytosol	69.51	69.68
Os01t0834200-01	Rice	cytosol	69.02	69.19
TraesCS3B01G385500.1	Wheat	cytosol	68.78	69.03
TraesCS3D01G346900.1	Wheat	golgi, unclear	68.66	68.91
TraesCS3A01G352800.1	Wheat	cytosol	68.29	68.54
Zm00001d042969_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	19.27	67.23
VIT_13s0175g00200.t01	Wine grape	cytosol	14.51	61.98
Bra010712.1-P	Field mustard	cytosol	60.61	60.68
Bra030300.1-P	Field mustard	cytosol	59.51	59.66
Bra011878.1-P	Field mustard	cytosol	54.39	59.63
Bra031187.1-P	Field mustard	cytosol	59.02	58.95
KXG29301	Sorghum	cytosol	3.05	58.14
Zm00001d046282_P001	Maize	cytosol	9.88	55.86
Zm00001d040680_P001	Maize	mitochondrion	7.44	53.51

Protein Annotations

MapMan:24.1.1.1.1	EnsemblPlantsGene:Bra035693	EnsemblPlants:Bra035693.1	EnsemblPlants:Bra035693.1-P	ncoils:Coil	GO:GO:0000220
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0033179	UniProt:M4F3P3	PFAM:PF01496
PIRSF:PIRSF001293	PANTHER:PTHR11629	PANTHER:PTHR11629:SF72	TMHMM:TMhelix	UniParc:UPI000254402F	InterPro:V-ATPase_116kDa_su
InterPro:V-type_ATPase_116kDa_su_euka	SEG:seg	:	:	:	:

Description

AT2G28520 (E=0.0) VHA-A1 | VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase

Coordinates

chrA04:+:12788011..12793240

Molecular Weight (calculated)

94158.8 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.009

Length

820 amino acids

Sequence
(BLAST)

001: MDDFLDKLPE MDLMRSEKMT LVQLIIPVES AHRCVTYLGE LGLLQFRDLN ADKSPFQRTF ATQVKRCGEM SRKLRFFKDQ IDKAGLRCLP RHEIEPDIEL
101: GDLERQLADH EHEVLEMNSN SEKLRLTYNE LLEFKIVLQK ASGFLVSSNA HAIGDETELH ESTYSNNGFI ESSSLLEQEM RHEPLNQSGL RFISGIINKD
201: KLLRFERMLF RATRGNMLFN QTPSDEEIMD PSTSEMVEKI VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNAVGY SLTKWMTTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSNSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQQ ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDATCSD AYTVGLVKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQA RFCYCLWLSL PFHGCFFQNL LHSEKFTRFQ GRTYGVLGTS EVDLDVEPDS ARGHQEEEFN
701: FSEIFVHQLI HSIEFVLGSV SNTASYLRLW ALSLAHSELS TVFYEKVLLL AWGYENILIR LIGVVVFAFA TAFILLMMET LSAFLHALRL HWVEFMGKFF
801: HGDGYKFKPF SFALISDDDE

Best Arabidopsis Sequence Match ( AT2G28520.1 )
(BLAST)

001: MEEFLDKLPQ MDLMRSEKMT LVQLIIPVES AHRSITYLGE LGLLQFRDLN ADKSPFQRTF ANQVKRCGEM SRKLRFFKDQ IDKAGLRCSP RLEIEPDIAL
101: GDLERQLADH EHEVLEMNSN SEKLRQTYNE LLEFKIVLEK ASGFLVSSNT HAIGEEIELH ESTYSNNGFI ETASLLEQEM NPGHSNQSGL RFISGIINKD
201: KLLKFERMLF RATRGNMLFN QTTSDEEIMD PSTSEMVEKV VFVVFFSGEQ ARTKILKICE AFGANCYPVP EDTTKQRQLT REVLSRLSDL EATLDAGTRH
301: RNNALNSVGY SLTNWITTVR REKAVYDTLN MLNFDVTKKC LVGEGWCPTF AKTQIHEVLQ RATFDSSSQV GVIFHVMQAV ESPPTYFRTN KLTNAFQEII
401: DAYGVARYQE ANPAVYSVVT YPFLFAVMFG DWGHGLCLLL GALYLLARER KLSTQKLGSF MEMLFGGRYV ILLMALFSIY CGLIYNEFFS VPFHIFGGSA
501: YKCRDTTCSD AYTVGLIKYR DPYPFGVDPS WRGSRTELPY LNSLKMKMSI LLGIAQMNLG LILSFFNARF FGSSLDIRYQ FIPQMIFLNS LFGYLSLLII
601: IKWCTGSQAD LYHVMIYMFL SPTEELGENE LFWGQRPLQI VLLLLAFIAV PWMLFPKPFA LRKIHMERFQ GRTYGVLVSS EVDLDVEPDS ARGGGHHEEE
701: FNFSEIFVHQ LIHSIEFVLG SVSNTASYLR LWALSLAHSE LSTVFYEKVL LLAWGYENIL IRLIGVAVFA FATAFILLMM ETLSAFLHAL RLHWVEFMGK
801: FFNGDGYKFK PFSFALI

Arabidopsis Description

VHA-A1V-type proton ATPase subunit a1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.