Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030300.1-P | Field mustard | cytosol | 98.53 | 98.66 |
| CDX99594 | Canola | cytosol | 98.29 | 97.81 |
| CDX82029 | Canola | cytosol | 93.89 | 93.67 |
| AT2G21410.1 | Thale cress | cytosol | 92.8 | 92.57 |
| CDY41958 | Canola | cytosol | 88.16 | 88.37 |
| CDY42603 | Canola | cytosol | 88.16 | 88.26 |
| CDX90307 | Canola | cytosol | 88.03 | 88.03 |
| CDY12118 | Canola | cytosol | 87.91 | 87.8 |
| CDY61341 | Canola | cytosol | 28.57 | 81.82 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 79.73 | 81.73 |
| CDY71986 | Canola | cytosol | 21.25 | 78.03 |
| KRH24405 | Soybean | endoplasmic reticulum | 77.53 | 77.63 |
| KRH29384 | Soybean | endoplasmic reticulum | 77.05 | 77.14 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 76.92 | 76.64 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 75.34 | 75.24 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 20.88 | 74.67 |
| KRG89695 | Soybean | extracellular, mitochondrion | 5.74 | 72.31 |
| CDX80454 | Canola | extracellular | 6.11 | 70.42 |
| CDY04571 | Canola | cytosol | 59.58 | 61.46 |
| CDY15756 | Canola | cytosol | 59.95 | 61.45 |
| CDY53381 | Canola | cytosol | 59.83 | 61.33 |
| CDX83292 | Canola | cytosol | 61.42 | 61.12 |
| CDX77187 | Canola | cytosol | 59.1 | 60.96 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 61.17 | 58.94 |
| CDX89488 | Canola | cytosol | 7.94 | 48.51 |
| CDX83291 | Canola | cytosol | 10.62 | 47.8 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078FN70 | UniProt:A0A078FN70 | EnsemblPlants:CDY15895 | ProteinID:CDY15895 | ProteinID:CDY15895.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00090255001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix |
| UniParc:UPI0004EE850D | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaA04g12160DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078FN70]
Coordinates
chrLK032059:-:343609..348504
Molecular Weight (calculated)
92802.8 Da
IEP (calculated)
5.568
GRAVY (calculated)
0.059
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEIGGGCCP PMDLMRSEPM QLVQVIVPME SAHLTVSYLG DLGLVQFKDL NSDKSPFQRT YAAQIKRCGE MARKLRFFKD QMSKAGVSPK EFLGKDVDID
101: LDDVEVKLGE LEAELSEINA NNDKLQRSYN ELMEYKLVLE KAGEFFASAH RSATTQQSEI ESQQQVGEDA LEAPLLQEEK SVDPTKQVKL GFLTGLVPRE
201: KSMVFERILF RATRGNIFIR QSVIEESVVD PSSGEKAEKN VFVVFYSGER AKSKILKICE AFGANRYPFS EELSKQAQMM TEVTGRLAEL KTTISAGLDH
301: RKILLETIGD KFEQWNLKVR KEKAIYHTLN MLSLDVTKKC LVGEGWSPVF ATPEIQKALE RAAVDSNSQV GSIFQVLRTK EMPPTFFRTN KFTTAFQEIV
401: DAYGVAIYQE ANPTVFTIVT FPFLFAVMFG DWGHGICLLI ATMYLVLKEK KLSSQKLGDI MEMAFGGRYV ILMMSLFSIY TGLIYNEFFS IPFPLFAPSA
501: YECRDASCSE ATTIGLIKTR DTYPFGVDPV WHGTRSELPF LNSLKMKMSI LLGVAQMNLG IIMSFCNAKF FKSAVNIWFQ FVPQMIFLNC LFGYLSALII
601: IKWCTGSQAD LYHVMIYMFL SPMEDLGENQ LFPHQKTVQL TFLFLALISV PWMLLPKPFI LKKQHEARHQ GQSYAQLEET DESLQVETNG GPHGHEEFEF
701: SEIFVHQLIH TIEFVLGAVS NTASYLRLWA LSLAHSELSS VFYEKVLLMA WGFNNFLILI VGILVFIFAT VGVLLVMETL SAFLHALRLH WVEYQNKFYE
801: GDGYKFAPFT FTLLGNEDE
101: LDDVEVKLGE LEAELSEINA NNDKLQRSYN ELMEYKLVLE KAGEFFASAH RSATTQQSEI ESQQQVGEDA LEAPLLQEEK SVDPTKQVKL GFLTGLVPRE
201: KSMVFERILF RATRGNIFIR QSVIEESVVD PSSGEKAEKN VFVVFYSGER AKSKILKICE AFGANRYPFS EELSKQAQMM TEVTGRLAEL KTTISAGLDH
301: RKILLETIGD KFEQWNLKVR KEKAIYHTLN MLSLDVTKKC LVGEGWSPVF ATPEIQKALE RAAVDSNSQV GSIFQVLRTK EMPPTFFRTN KFTTAFQEIV
401: DAYGVAIYQE ANPTVFTIVT FPFLFAVMFG DWGHGICLLI ATMYLVLKEK KLSSQKLGDI MEMAFGGRYV ILMMSLFSIY TGLIYNEFFS IPFPLFAPSA
501: YECRDASCSE ATTIGLIKTR DTYPFGVDPV WHGTRSELPF LNSLKMKMSI LLGVAQMNLG IIMSFCNAKF FKSAVNIWFQ FVPQMIFLNC LFGYLSALII
601: IKWCTGSQAD LYHVMIYMFL SPMEDLGENQ LFPHQKTVQL TFLFLALISV PWMLLPKPFI LKKQHEARHQ GQSYAQLEET DESLQVETNG GPHGHEEFEF
701: SEIFVHQLIH TIEFVLGAVS NTASYLRLWA LSLAHSELSS VFYEKVLLMA WGFNNFLILI VGILVFIFAT VGVLLVMETL SAFLHALRLH WVEYQNKFYE
801: GDGYKFAPFT FTLLGNEDE
001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
Arabidopsis Description
VHA-A2V-type proton ATPase subunit a2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.