Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41958 | Canola | cytosol | 97.92 | 98.04 |
| CDX90307 | Canola | cytosol | 94.5 | 94.38 |
| CDY12118 | Canola | cytosol | 94.5 | 94.27 |
| AT4G39080.1 | Thale cress | cytosol, nucleus, plasma membrane | 92.91 | 92.57 |
| CDX99594 | Canola | cytosol | 88.75 | 88.21 |
| CDX82029 | Canola | cytosol | 88.51 | 88.19 |
| CDY15895 | Canola | cytosol | 88.26 | 88.16 |
| KRH24405 | Soybean | endoplasmic reticulum | 78.97 | 78.97 |
| KRH29384 | Soybean | endoplasmic reticulum | 78.85 | 78.85 |
| VIT_03s0038g00290.t01 | Wine grape | cytosol | 78.85 | 78.47 |
| CDY61341 | Canola | cytosol | 27.38 | 78.32 |
| Solyc01g110120.2.1 | Tomato | nucleus, plastid | 77.75 | 77.56 |
| CDY13818 | Canola | cytosol, nucleus, plastid | 75.67 | 77.47 |
| CDY71986 | Canola | cytosol | 20.05 | 73.54 |
| CDX96169 | Canola | cytosol, plasma membrane, plastid | 19.8 | 70.74 |
| KRG89695 | Soybean | extracellular, mitochondrion | 5.5 | 69.23 |
| CDX80454 | Canola | extracellular | 5.87 | 67.61 |
| CDY15756 | Canola | cytosol | 61.25 | 62.7 |
| CDY53381 | Canola | cytosol | 61.0 | 62.45 |
| CDY04571 | Canola | cytosol | 60.39 | 62.22 |
| CDX83292 | Canola | cytosol | 62.47 | 62.09 |
| CDX77187 | Canola | cytosol | 59.9 | 61.71 |
| CDY63878 | Canola | cytosol, plasma membrane, plastid | 62.22 | 59.88 |
| CDX83291 | Canola | cytosol | 10.64 | 47.8 |
| CDX89488 | Canola | cytosol | 7.7 | 47.01 |
Protein Annotations
| MapMan:24.1.1.1.1 | GO:A0A078I0L3 | UniProt:A0A078I0L3 | EnsemblPlants:CDY42603 | ProteinID:CDY42603 | ProteinID:CDY42603.1 |
| ncoils:Coil | GO:GO:0000220 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0015078 | GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0033179 |
| EnsemblPlantsGene:GSBRNA2T00075109001 | PFAM:PF01496 | PIRSF:PIRSF001293 | PANTHER:PTHR11629 | PANTHER:PTHR11629:SF89 | TMHMM:TMhelix |
| UniParc:UPI0004EDF316 | InterPro:V-ATPase_116kDa_su | InterPro:V-type_ATPase_116kDa_su_euka | SEG:seg | : | : |
Description
BnaC01g00150DV-type proton ATPase subunit a [Source:UniProtKB/TrEMBL;Acc:A0A078I0L3]
Coordinates
chrLK032530:+:52202..57320
Molecular Weight (calculated)
92506.5 Da
IEP (calculated)
6.104
GRAVY (calculated)
0.080
Length
818 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESGGCCPP MDLMRSEPMQ LVQLIVPMES AHLTVSYLGD LGLVQFKDLN PEKSPFQRTY AAQIKRCGEM ARKIRFFKDQ MSKAGVLPKD SLENGTHIID
101: LDDVEVKLGE LEAELVEINA NNDKLQRSYN ELIEYKLVLD KAGEFFSSAH TSATAQQIEI ESQQVGQDLL EAPLLQQDKS IDSSKQVKLG FLTGLVPREK
201: SMVFERILFR ATRGNVFIRQ TVIEEPVIDP NSGEKAEKNV FVVFYSGERA KSKILKICEA FGANRYPFSE DLGKQAQMIT EVSGRLTELK TTIDAGLGHR
301: NILLHAIGDK FELWNLKVRK EKAIYHTLNM LSLDVTKKCL VAEGWSPVFA SNEIQNALKR AAVDSNSQVG SIFQVLRTKE LPPTYFRTNK FTSAIQEIVD
401: AYGVAKYQEA NPGVFTIVTF PFLFAVMFGD WGHGICLLLA TMYLIVREKK LSSQKLGDIM EMAFGGRYVI MMMSLFSIYT GLIYNEFFSI PYPLFAPSAY
501: DCRDASCSEA TTIGLIKVRD TYPFGLDPVW HGTRSELPFL NSLKMKMSIL LGVSQMNLGI IMSYFNARFF KSSVNIWFQF IPQMIFLNSL FGYLSVLIII
601: KWCTGSQADL YHVMIYMFLS PTDELGENQL FPHQKTVQLV LLFLALVSVP CMLLPKPFIL KKQHEARHQG QSYAPLEETD ESLHVEANGG SHGHEEFEFS
701: EIFVHQLIHT IEFVLGAVSN TASYLRLWAL SLAHSELSSV FYEKVLLLAW GYNNWLILIV GIIVFIFATV GVLLVMETLS AFLHALRLHW VEFQNKFYEG
801: DGYKFAPFSF ILTANEDE
101: LDDVEVKLGE LEAELVEINA NNDKLQRSYN ELIEYKLVLD KAGEFFSSAH TSATAQQIEI ESQQVGQDLL EAPLLQQDKS IDSSKQVKLG FLTGLVPREK
201: SMVFERILFR ATRGNVFIRQ TVIEEPVIDP NSGEKAEKNV FVVFYSGERA KSKILKICEA FGANRYPFSE DLGKQAQMIT EVSGRLTELK TTIDAGLGHR
301: NILLHAIGDK FELWNLKVRK EKAIYHTLNM LSLDVTKKCL VAEGWSPVFA SNEIQNALKR AAVDSNSQVG SIFQVLRTKE LPPTYFRTNK FTSAIQEIVD
401: AYGVAKYQEA NPGVFTIVTF PFLFAVMFGD WGHGICLLLA TMYLIVREKK LSSQKLGDIM EMAFGGRYVI MMMSLFSIYT GLIYNEFFSI PYPLFAPSAY
501: DCRDASCSEA TTIGLIKVRD TYPFGLDPVW HGTRSELPFL NSLKMKMSIL LGVSQMNLGI IMSYFNARFF KSSVNIWFQF IPQMIFLNSL FGYLSVLIII
601: KWCTGSQADL YHVMIYMFLS PTDELGENQL FPHQKTVQLV LLFLALVSVP CMLLPKPFIL KKQHEARHQG QSYAPLEETD ESLHVEANGG SHGHEEFEFS
701: EIFVHQLIHT IEFVLGAVSN TASYLRLWAL SLAHSELSSV FYEKVLLLAW GYNNWLILIV GIIVFIFATV GVLLVMETLS AFLHALRLHW VEFQNKFYEG
801: DGYKFAPFSF ILTANEDE
001: MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
101: IDLDDVEVKL GELEAELVEI NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE KSIDSTKQVK LGFLTGLVPR
201: EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG
301: QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLDVTKK CLVAEGWSPV FASREIQDAL QRAAVDSNSQ VGSIFQVLRT KESPPTYFRT NKFTSAIQEI
401: VDAYGVAKYQ EANPGVFTIV TFPFLFAVMF GDWGHGICIL LATMYLILKE KKLASQKLGD IMEMAFGGRY VILMMSLFSI YTGLIYNEFF SIPFPLFAPS
501: AYDCRDVSCS EATTIGLIKV RDTYPFGLDP VWHGSRSELP FLNSLKMKMS ILLGVSQMNL GIIMSYFNAR FFKSSVNIWF QFIPQMIFLN SLFGYLSVLI
601: IIKWCTGSQA DLYHVMIYMF LSPMDELGEN QLFPHQKTLQ LVLLFLALVS VPCMLLPKPF ILKKQHEARH QGQAYAPLDE TDESLHVETN GGGSHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL LAWGYNNPLI LIVGVLVFIF ATVGVLLVME TLSAFLHALR LHWVEFQNKF
801: YEGDGYKFAP FTFIFTANED E
Arabidopsis Description
VHA-A3V-type proton ATPase subunit a3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S4]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.