Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g00340.t01 | Wine grape | mitochondrion, plastid | 62.83 | 36.19 |
| VIT_07s0005g05810.t01 | Wine grape | cytosol | 4.07 | 33.82 |
| VIT_16s0100g00180.t01 | Wine grape | cytosol | 4.07 | 33.82 |
| VIT_04s0008g05870.t01 | Wine grape | mitochondrion | 52.57 | 30.87 |
| VIT_14s0108g01500.t01 | Wine grape | plastid | 52.74 | 30.53 |
| VIT_17s0000g07190.t01 | Wine grape | nucleus | 48.5 | 30.08 |
| VIT_19s0014g00020.t01 | Wine grape | plastid | 49.2 | 29.39 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | ProteinID:CCB46979 |
| ProteinID:CCB46979.1 | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | UniProt:F6H436 |
| EMBL:FN595232 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 |
| PANTHER:PTHR43572 | PANTHER:PTHR43572:SF8 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | UniParc:UPI000210A96B |
| ArrayExpress:VIT_14s0068g01220 | EnsemblPlantsGene:VIT_14s0068g01220 | EnsemblPlants:VIT_14s0068g01220.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr14:+:24986266..24988426
Molecular Weight (calculated)
63150.8 Da
IEP (calculated)
6.230
GRAVY (calculated)
-0.259
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLEQKTFK TDMLNKYGTD LTKLAEQNKL DPVMGRQMQI ERVMQILCKR RKNNPCLIGD PGVGKTVIAE GFAQDIAKSR APFKLLQKKL CFTGILFGHK
101: PEGEIILFID EAHTLVGAGS GGQALDAANI LKPALAKGEL KCIAATTVDE YVKYIEKDPA LKRRFQPVDV PEPSVEDAIE ILKGLSKKYE AHHHVQYSDN
201: ALIAAARLSS QYISEYYLPD KAIDLIDEAG ARVQLHQPRM STKIPTITEM DIQHIISSRT GIPLEKLSAK ELMKLVDMEE TPRESIIGQD DAVKAICRAL
301: RRDGAGIRDP TRPIASFLFT GPTGVGKTEL AKLIALEYFG SKEAMVRIDM SEYMEKHTVS RLCGSPPGYV GHDEGGQLTE AVRRRPYNLV LFDEIEKAHR
401: DVMNVMLQIL DDGRLTDGKG RTVDFKNTLI IMTSNIGGSL ITQTKIQLGF EQVKNLVAEE LKKNFLPEFL NRLDEVIVFK QLSKPQLREI VDIRLEEVYT
501: RFEEAKNINV EVTEELKEKL VEEGFSPGYG ARPLRRAIVS LLEDKVADMI LEGTIVEGDT VSIGI
101: PEGEIILFID EAHTLVGAGS GGQALDAANI LKPALAKGEL KCIAATTVDE YVKYIEKDPA LKRRFQPVDV PEPSVEDAIE ILKGLSKKYE AHHHVQYSDN
201: ALIAAARLSS QYISEYYLPD KAIDLIDEAG ARVQLHQPRM STKIPTITEM DIQHIISSRT GIPLEKLSAK ELMKLVDMEE TPRESIIGQD DAVKAICRAL
301: RRDGAGIRDP TRPIASFLFT GPTGVGKTEL AKLIALEYFG SKEAMVRIDM SEYMEKHTVS RLCGSPPGYV GHDEGGQLTE AVRRRPYNLV LFDEIEKAHR
401: DVMNVMLQIL DDGRLTDGKG RTVDFKNTLI IMTSNIGGSL ITQTKIQLGF EQVKNLVAEE LKKNFLPEFL NRLDEVIVFK QLSKPQLREI VDIRLEEVYT
501: RFEEAKNINV EVTEELKEKL VEEGFSPGYG ARPLRRAIVS LLEDKVADMI LEGTIVEGDT VSIGI
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.