Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g089770.2.1 | Tomato | cytosol | 56.86 | 59.18 |
| PGSC0003DMT400026192 | Potato | cytosol | 56.58 | 58.89 |
| VIT_14s0066g01150.t01 | Wine grape | cytosol | 36.41 | 36.01 |
| VIT_02s0012g01570.t01 | Wine grape | extracellular | 27.45 | 33.68 |
| VIT_16s0039g01670.t01 | Wine grape | cytosol | 29.13 | 33.33 |
| VIT_11s0037g01030.t01 | Wine grape | cytosol | 24.65 | 30.56 |
Protein Annotations
| EntrezGene:100241301 | wikigene:100241301 | Gene3D:3.40.50.720 | MapMan:35.1 | InterPro:3Beta_OHSteriod_DH/Estase | ProteinID:CCB44050 |
| ProteinID:CCB44050.1 | UniProt:F6GVR5 | EMBL:FN594955 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003854 |
| GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016491 |
| GO:GO:0016616 | GO:GO:0055114 | EntrezGene:LOC100241301 | wikigene:LOC100241301 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01073 |
| PANTHER:PTHR10366 | PANTHER:PTHR10366:SF445 | SUPFAM:SSF51735 | UniParc:UPI00015C82C3 | ArrayExpress:VIT_14s0083g00320 | EnsemblPlantsGene:VIT_14s0083g00320 |
| EnsemblPlants:VIT_14s0083g00320.t01 | unigene:Vvi.1676 | RefSeq:XP_002283020 | RefSeq:XP_002283020.2 | : | : |
Description
No Description!
Coordinates
chr14:-:22368033..22370374
Molecular Weight (calculated)
39740.8 Da
IEP (calculated)
6.692
GRAVY (calculated)
-0.168
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MENCREEVVL SKPLLLPSFK EEQQRKCVGN AFGSSLNARE RKLVCVTSGN SYLSSHIVRE LLAGGYLVRV TIQKEVDFGV MNELLRDEEM NQLESVVVAK
101: MGDLDSLCDA FRGCHAVFHT SSFIDIHGVS GYSEWMAFLE TEAARNVIEA CCRAAYVKRC VFTSSLLASI WTDDDRTGII DESCWSDEEF CRDRKLWLAM
201: GKTAAEKVAW SKSQEMKVKL VTVCPGLLMA PSFPNAHTET SVPYLKGGRM MLQRGVLATN DISKVAKAHV HVYEEMDYGA CGRYFCFERV VRRLDEAIQL
301: ENNLKMHGQL SGGGNLPSST QETDGEIQIS LSNSKLAKLM LRASQRSSCK QSSLIAA
101: MGDLDSLCDA FRGCHAVFHT SSFIDIHGVS GYSEWMAFLE TEAARNVIEA CCRAAYVKRC VFTSSLLASI WTDDDRTGII DESCWSDEEF CRDRKLWLAM
201: GKTAAEKVAW SKSQEMKVKL VTVCPGLLMA PSFPNAHTET SVPYLKGGRM MLQRGVLATN DISKVAKAHV HVYEEMDYGA CGRYFCFERV VRRLDEAIQL
301: ENNLKMHGQL SGGGNLPSST QETDGEIQIS LSNSKLAKLM LRASQRSSCK QSSLIAA
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.