Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g089770.2.1 | Tomato | cytosol | 93.88 | 93.88 |
| VIT_14s0083g00320.t01 | Wine grape | cytosol | 58.89 | 56.58 |
| PGSC0003DMT400001401 | Potato | cytosol | 36.44 | 34.72 |
| PGSC0003DMT400019823 | Potato | cytosol, plastid | 29.45 | 32.17 |
| PGSC0003DMT400008172 | Potato | cytosol | 27.41 | 27.41 |
| PGSC0003DMT400045216 | Potato | plastid | 29.45 | 18.0 |
| PGSC0003DMT400045987 | Potato | cytosol | 2.92 | 1.9 |
Protein Annotations
| EntrezGene:102584871 | Gene3D:3.40.50.720 | MapMan:35.1 | InterPro:3Beta_OHSteriod_DH/Estase | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003854 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0016491 | GO:GO:0016616 | GO:GO:0055114 | UniProt:M1AMT9 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF01073 | EnsemblPlantsGene:PGSC0003DMG400010092 | PGSC:PGSC0003DMG400010092 | EnsemblPlants:PGSC0003DMT400026192 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF445 |
| SUPFAM:SSF51735 | UniParc:UPI0002951071 | RefSeq:XP_006338284.1 | : | : | : |
Description
Cinnamoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400010092]
Coordinates
chr2:-:44944475..44946675
Molecular Weight (calculated)
38498.7 Da
IEP (calculated)
7.213
GRAVY (calculated)
-0.053
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAISLELE PLKQMNDHGM FFSSGNFICS LNARDRKIVC VTSGNSYFGS HLIKKLLAYG YLVRVIIQNQ ANLEDMKELM REEVKQLESV VVARMDDLDS
101: LCNAFRGCHV VFHTSSFVDP RGISGYTERM AFIEAEAAKN VIEACGRAAY VKRCIFTSSL LACIWKNDLP NLIDESSWSD ETFCREHKLW LALAKTRAEK
201: VAWRKAREMK VKLVTLCPGL LMAPSFPNAH LETSLPYLKG GYFMLRQGIL ATEDVSKVAE AHIYVYEDMD YGACGRYICF GNIVGTLEEA IQLENGLNIS
301: GHLSGDQSPL AVAVENNEIP PRITKSKLSR LLFHASQRLP CKH
101: LCNAFRGCHV VFHTSSFVDP RGISGYTERM AFIEAEAAKN VIEACGRAAY VKRCIFTSSL LACIWKNDLP NLIDESSWSD ETFCREHKLW LALAKTRAEK
201: VAWRKAREMK VKLVTLCPGL LMAPSFPNAH LETSLPYLKG GYFMLRQGIL ATEDVSKVAE AHIYVYEDMD YGACGRYICF GNIVGTLEEA IQLENGLNIS
301: GHLSGDQSPL AVAVENNEIP PRITKSKLSR LLFHASQRLP CKH
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.