Factsheet for PGSC0003DMT400008172

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g097170.2.1	Tomato	cytosol	88.05	92.07
VIT_16s0039g01670.t01	Wine grape	cytosol	57.14	62.82
PGSC0003DMT400019823	Potato	cytosol, plastid	53.94	58.92
GSMUA_Achr4P28860_001	Banana	plastid	46.65	53.16
GSMUA_Achr5P03490_001	Banana	plastid	46.36	51.13
GSMUA_Achr4P16990_001	Banana	cytosol	44.31	50.33
TraesCS1B01G209700.1	Wheat	cytosol	43.44	48.53
Os10t0576900-01	Rice	cytosol	44.61	47.96
TraesCS1D01G198500.1	Wheat	cytosol	42.86	47.73
TraesCS1A01G194900.1	Wheat	cytosol	42.86	47.57
EER94430	Sorghum	cytosol	44.61	46.22
Zm00001d030090_P001	Maize	cytosol, plastid	44.02	46.18
GSMUA_Achr3P03360_001	Banana	cytosol	44.02	45.76
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	28.57	44.75
Zm00001d051557_P001	Maize	plastid	25.95	43.84
AT2G23910.1	Thale cress	cytosol	37.61	42.43
CDY65186	Canola	cytosol	37.03	41.91
CDY39681	Canola	cytosol	37.03	41.91
CDX72244	Canola	cytosol	37.03	41.91
Bra032137.1-P	Field mustard	cytosol	37.03	41.91
Bra024073.1-P	Field mustard	cytosol	37.03	41.91
AT4G30470.1	Thale cress	cytosol	36.73	41.58
CDY39207	Canola	cytosol, extracellular, nucleus	13.12	34.88
PGSC0003DMT400045216	Potato	plastid	51.6	31.55
PGSC0003DMT400001401	Potato	cytosol	29.15	27.78
PGSC0003DMT400026192	Potato	cytosol	27.41	27.41
PGSC0003DMT400045987	Potato	cytosol	2.62	1.71

Protein Annotations

EnsemblPlants:PGSC0003DMT400008172	EnsemblPlantsGene:PGSC0003DMG400003152	EntrezGene:102586375	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF428	PGSC:PGSC0003DMG400003152	SUPFAM:SSF51735	UniParc:UPI0002948F2D	UniProt:M0ZU73	MapMan:35.1

Description

Cinnamoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400003152]

Coordinates

chr3:-:46577233..46579471

Molecular Weight (calculated)

38481.8 Da

IEP (calculated)

5.530

GRAVY (calculated)

-0.184

Length

343 amino acids

Sequence
(BLAST)

001: MTIAADFYDE QDSVFCSKRV CVMDAAGQLG SAIVHQLLLR GYTVHAAFQN HGSSSHPICG IVVVFVYEMQ CFKMKYGCGN DDSKSKKLIC FHADPLDYHS
101: IVDALKGCCG LFYSFETPSD YPTYDELMGE MEVRAAHNVM EACAQTDTLN KVVFTSSATA VLWGTRKRDQ HDSPVASHSH SYVDERDWTD INFCKKYKLW
201: HGLSKTQAEK AAWALAMDRE VNMVSINGGL LIHPDLNIRE PYLKGAAEMY EDGVFVAVDL KFLVDAHMCV FEDVSSYGRY LCFNRVINTT KDATTLANML
301: LPPSASSETQ RLEDDTVYEQ RISNKKLNKL MLGFDTGLEV QVN

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.