Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39681 | Canola | cytosol | 87.5 | 87.79 |
| CDY65186 | Canola | cytosol | 86.84 | 87.13 |
| Bra032137.1-P | Field mustard | cytosol | 86.18 | 86.47 |
| AT4G30470.1 | Thale cress | cytosol | 80.26 | 80.53 |
| VIT_11s0037g01030.t01 | Wine grape | cytosol | 63.82 | 67.36 |
| KRH39555 | Soybean | cytosol | 43.42 | 44.15 |
| Solyc08g076790.2.1 | Tomato | cytosol | 45.07 | 43.49 |
| Zm00001d034716_P001 | Maize | cytosol, nucleus, peroxisome | 31.25 | 43.38 |
| KRH74401 | Soybean | cytosol | 42.43 | 43.14 |
| PGSC0003DMT400019823 | Potato | cytosol, plastid | 44.41 | 42.99 |
| Zm00001d051557_P001 | Maize | plastid | 28.62 | 42.86 |
| GSMUA_Achr4P28860_001 | Banana | plastid | 42.11 | 42.52 |
| Solyc06g061280.2.1 | Tomato | cytosol, plastid | 43.09 | 42.12 |
| GSMUA_Achr4P16990_001 | Banana | cytosol | 41.45 | 41.72 |
| KRH45421 | Soybean | cytosol | 40.13 | 41.08 |
| TraesCS1B01G209700.1 | Wheat | cytosol | 41.12 | 40.72 |
| TraesCS1D01G198500.1 | Wheat | cytosol | 40.79 | 40.26 |
| GSMUA_Achr5P03490_001 | Banana | plastid | 41.12 | 40.19 |
| TraesCS1A01G194900.1 | Wheat | cytosol | 40.79 | 40.13 |
| Zm00001d030090_P001 | Maize | cytosol, plastid | 42.43 | 39.45 |
| EER94430 | Sorghum | cytosol | 42.76 | 39.27 |
| Os10t0576900-01 | Rice | cytosol | 41.12 | 39.19 |
| Solyc03g097170.2.1 | Tomato | cytosol | 41.45 | 38.41 |
| GSMUA_Achr3P03360_001 | Banana | cytosol | 41.12 | 37.88 |
| PGSC0003DMT400008172 | Potato | cytosol | 42.43 | 37.61 |
| AT5G14700.1 | Thale cress | cytosol | 32.57 | 26.9 |
| PGSC0003DMT400045216 | Potato | plastid | 41.78 | 22.64 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:816923 | ProteinID:AAC63661.2 | ProteinID:AEC07501.1 | ProteinID:ANM63127.1 |
| ArrayExpress:AT2G23910 | EnsemblPlantsGene:AT2G23910 | RefSeq:AT2G23910 | TAIR:AT2G23910 | RefSeq:AT2G23910-TAIR-G | EnsemblPlants:AT2G23910.1 |
| TAIR:AT2G23910.1 | Unigene:At.27976 | EMBL:BT029369 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0080167 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001325238.1 | RefSeq:NP_565557.1 | UniProt:O82219 |
| PFAM:PF13460 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF390 | SUPFAM:SSF51735 |
| UniParc:UPI000009D149 | : | : | : | : | : |
Description
At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
Coordinates
chr2:+:10177781..10180088
Molecular Weight (calculated)
34384.1 Da
IEP (calculated)
4.722
GRAVY (calculated)
-0.215
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.