Factsheet for Zm00001d051557_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	63.55	58.9
Zm00001d030090_P001	Maize	cytosol, plastid	83.74	51.99
EER94430	Sorghum	cytosol	78.82	48.34
TraesCS1D01G198500.1	Wheat	cytosol	66.5	43.83
Os10t0576900-01	Rice	cytosol	68.47	43.57
TraesCS1A01G194900.1	Wheat	cytosol	66.01	43.37
TraesCS1B01G209700.1	Wheat	cytosol	65.02	43.0
GSMUA_Achr4P28860_001	Banana	plastid	59.61	40.2
GSMUA_Achr4P16990_001	Banana	cytosol	59.61	40.07
GSMUA_Achr5P03490_001	Banana	plastid	58.62	38.26
VIT_02s0012g01570.t01	Wine grape	extracellular	48.77	34.02
GSMUA_Achr3P03360_001	Banana	cytosol	54.68	33.64
CDY39207	Canola	cytosol, extracellular, nucleus	21.18	33.33
Solyc08g076790.2.1	Tomato	cytosol	50.25	32.38
KRH39555	Soybean	cytosol	46.31	31.44
KRH74401	Soybean	cytosol	45.81	31.1
PGSC0003DMT400019823	Potato	cytosol, plastid	47.78	30.89
Solyc06g061280.2.1	Tomato	cytosol, plastid	46.8	30.55
VIT_16s0039g01670.t01	Wine grape	cytosol	46.31	30.13
KRH45421	Soybean	cytosol	43.35	29.63
AT2G23910.1	Thale cress	cytosol	42.86	28.62
CDX72244	Canola	cytosol	42.36	28.38
Bra024073.1-P	Field mustard	cytosol	42.36	28.38
AT4G30470.1	Thale cress	cytosol	41.87	28.05
CDY65186	Canola	cytosol	41.87	28.05
CDY39681	Canola	cytosol	41.87	28.05
Bra032137.1-P	Field mustard	cytosol	41.87	28.05
Solyc03g097170.2.1	Tomato	cytosol	43.84	27.13
PGSC0003DMT400008172	Potato	cytosol	43.84	25.95
Zm00001d044104_P001	Maize	cytosol	32.02	17.47
Zm00001d011446_P001	Maize	cytosol	32.51	17.32
Zm00001d009666_P001	Maize	cytosol	30.54	16.62
PGSC0003DMT400045216	Potato	plastid	45.32	16.4

Protein Annotations

EnsemblPlants:Zm00001d051557_P001	EnsemblPlants:Zm00001d051557_T001	EnsemblPlantsGene:Zm00001d051557	EntrezGene:103655639	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	ProteinID:AQK54545.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004DEB375
UniProt:A0A1Q0YQR6	MapMan:35.1	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr4:-:162758601..162761906

Molecular Weight (calculated)

21796.3 Da

IEP (calculated)

8.078

GRAVY (calculated)

0.026

Length

203 amino acids

Sequence
(BLAST)

001: MERVVFTSSV TAVIWSGAGA GAHRVEVADE RSWSDLAFCR KFKLWHALAK TLSEKTAWAL AMDRGVDMVA INAGLLLAAP EPGLGLTAAH PYLKGAPDMY
101: DGGVLATVDV GFLADAHVAA YESPTVYGRY LCFSNAVCRP EDAVKLAQML SPAPPRSSPP SDELKVIPQR IQGKKLNKLM LEFASGVYTI QGDGLGRNSL
201: PHR

Best Arabidopsis Sequence Match ( AT2G23910.4 )
(BLAST)

001: MGSSSLMGES VLEEKIRDME ANEERLEVYD VDVLDYQSIL ISLNNCNAVF CCLDNPEGYD EEKEVDLEVR GAINVVEACA RTESIEKIVF SSSLTAAIWR
101: DNIGTQKDVD EKCWSDLDFC LKKKLWHALA KTQSEKAAWA LAMDRMVNMV SVNPGLIVGP SVAQHNPRPT MSYLKGAAQM YENGVLAYVD VEFVADVHIR
201: AFEDTSACGR YFCFNQIVNT EEEALKLVQT LSPLIPMPPR HEKEMQGSEV YEERLRNKKL NKLVEAGFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.