Factsheet for Solyc06g061280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019823	Potato	cytosol, plastid	91.96	91.08
Solyc08g076790.2.1	Tomato	cytosol	69.45	68.57
VIT_02s0012g01570.t01	Wine grape	extracellular	63.34	67.7
KRH39555	Soybean	cytosol	62.38	64.88
KRH74401	Soybean	cytosol	60.13	62.54
KRH45421	Soybean	cytosol	57.23	59.93
GSMUA_Achr4P28860_001	Banana	plastid	57.23	59.14
Solyc03g097170.2.1	Tomato	cytosol	58.52	55.49
GSMUA_Achr4P16990_001	Banana	cytosol	53.05	54.64
GSMUA_Achr5P03490_001	Banana	plastid	53.38	53.38
TraesCS1B01G209700.1	Wheat	cytosol	50.16	50.81
TraesCS1D01G198500.1	Wheat	cytosol	50.16	50.65
TraesCS1A01G194900.1	Wheat	cytosol	49.84	50.16
Os10t0576900-01	Rice	cytosol	51.13	49.84
GSMUA_Achr3P03360_001	Banana	cytosol	51.45	48.48
EER94430	Sorghum	cytosol	50.16	47.13
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	33.12	47.03
Zm00001d051557_P001	Maize	plastid	30.55	46.8
Zm00001d030090_P001	Maize	cytosol, plastid	49.2	46.79
CDX72244	Canola	cytosol	42.77	43.89
Bra024073.1-P	Field mustard	cytosol	42.77	43.89
AT4G30470.1	Thale cress	cytosol	42.12	43.23
AT2G23910.1	Thale cress	cytosol	42.12	43.09
CDY65186	Canola	cytosol	39.87	40.92
CDY39681	Canola	cytosol	39.87	40.92
Bra032137.1-P	Field mustard	cytosol	39.87	40.92
CDY39207	Canola	cytosol, extracellular, nucleus	16.4	39.53
Solyc02g089770.2.1	Tomato	cytosol	32.8	29.74
Solyc02g086770.2.1	Tomato	cytosol	29.9	25.83
Solyc08g005120.2.1	Tomato	plastid	2.57	3.35

Protein Annotations

EnsemblPlants:Solyc06g061280.2.1	EnsemblPlantsGene:Solyc06g061280.2	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002766754	UniProt:K4C6V8	MapMan:35.1	:

Description

No Description!

Coordinates

chr6:-:39275855..39278569

Molecular Weight (calculated)

35043.9 Da

IEP (calculated)

4.856

GRAVY (calculated)

-0.215

Length

311 amino acids

Sequence
(BLAST)

001: MAPASYNCIF NTICVMDAST RLGTKLVKRL LKRGYTVHAA IQNHGESSSL KGIECEEKKL KIFESDPFDY HSILDALKGC SGLFYNFESP PDYPTYDEEM
101: GEVEVRAAHN VLEACAQTDT IEKVVFTSSA TTIIWGHDAP SIDERHWTDI NFCRKFKLWY AMSKTLAEKT AWGLAMDRGI NMVTINSGLL MGPELTITNP
201: YLKGAAEMYE DGVFVTVDLD FLVDAHICVY EDIASYGRYL CFNHIINQKQ DALELVQMLS PLPSPPQSLE ENTTIIQQRI SNKKLSKLMV DFRGCQPQMM
301: DQNANQDTCL S

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.