CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024073.1-P	Field mustard	cytosol	100.0	100.0
AT4G30470.1	Thale cress	cytosol	92.08	92.08
CDY39681	Canola	cytosol	85.48	85.48
CDY65186	Canola	cytosol	85.15	85.15
CDY39207	Canola	cytosol, extracellular, nucleus	32.01	75.19
VIT_11s0037g01030.t01	Wine grape	cytosol	63.04	66.32
KRH39555	Soybean	cytosol	43.56	44.15
GSMUA_Achr4P28860_001	Banana	plastid	42.9	43.19
KRH74401	Soybean	cytosol	42.57	43.14
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	31.02	42.92
Solyc08g076790.2.1	Tomato	cytosol	44.55	42.86
Solyc06g061280.2.1	Tomato	cytosol, plastid	43.89	42.77
PGSC0003DMT400019823	Potato	cytosol, plastid	44.22	42.68
Zm00001d051557_P001	Maize	plastid	28.38	42.36
GSMUA_Achr4P16990_001	Banana	cytosol	41.58	41.72
KRH45421	Soybean	cytosol	39.93	40.74
GSMUA_Achr5P03490_001	Banana	plastid	41.25	40.19
TraesCS1B01G209700.1	Wheat	cytosol	40.26	39.74
TraesCS1D01G198500.1	Wheat	cytosol	39.93	39.29
TraesCS1A01G194900.1	Wheat	cytosol	39.93	39.16
Os10t0576900-01	Rice	cytosol	40.59	38.56
Zm00001d030090_P001	Maize	cytosol, plastid	41.58	38.53
EER94430	Sorghum	cytosol	41.91	38.37
Solyc03g097170.2.1	Tomato	cytosol	40.92	37.8
GSMUA_Achr3P03360_001	Banana	cytosol	40.59	37.27
PGSC0003DMT400008172	Potato	cytosol	41.91	37.03
CDY09878	Canola	cytosol	33.66	27.72
CDX85588	Canola	cytosol	33.66	27.72
CDX69564	Canola	cytosol	33.66	27.72
CDX91029	Canola	cytosol	33.0	27.25
PGSC0003DMT400045216	Potato	plastid	41.25	22.28

Protein Annotations

EnsemblPlants:CDX72244	EnsemblPlantsGene:GSBRNA2T00099711001	Gene3D:3.40.50.720	GO:A0A078C7T2	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
ncoils:Coil	PANTHER:PTHR10366	PANTHER:PTHR10366:SF390	PFAM:PF13460	ProteinID:CDX72244	ProteinID:CDX72244.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002540E24	MapMan:35.1	:	:

Description

BnaC07g42660D

Coordinates

chrLK031796:+:230278..233450

Molecular Weight (calculated)

34151.8 Da

IEP (calculated)

4.706

GRAVY (calculated)

-0.199

Length

303 amino acids

Sequence
(BLAST)

001: MDQEKSHSCC CVLDASTYVG FWILKKLLSR GYSVHAAIRK NGDSEIEETI REMEATEERL VVYDVDVLDY QSILVSLKTC NAVFCCLDSP EGYDEKEVDL
101: EVRGAINVVE ACGRTESIEK IVFSSSLTAS IWRDNIGTQK DVDEKCWSDQ DFCRNKKLWH ALAKMLSEKA AWALAMDRRL NMVSINPGLI VGPSVAQYNP
201: RPTMSYLKGA AQMYENGVLA YVDVKFLADV HIRAYEDVSA CGRYFCFNQI VNTEEEALKL VESLSPLIPM PPRYESVMQG SEVYEERLRN NKLSKLVEAG
301: SAC

Best Arabidopsis Sequence Match ( AT4G30470.1 )
(BLAST)

001: MDHDKSTSCC CVLDASTYVG FWILKKLLSR GYSVHAAIRR NGESEIEEMI REMETTEERL VVYDVDVLDY QSILVSLKTC NVVFCCLDSP EGYDEKEVDL
101: EVRGAINVVE ACGRTESIEK IVFSSSLTAS IWRDNIGTQK DVDEKCWSDQ DFCRSKKLWH ALAKMLSEKA AWALAMDRRL NMVSINPGLV VGPSVAQHNA
201: RPTMSYLKGA AQMYENGVLA YVDVKFLADV HIRAFEDVSA CGRYFCFNQI VNTEEEALKL VESLSPLIPM PPRYENEMHG SEVYEERLRN NKLSKLVEAG
301: SAC

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.