Factsheet for GSMUA_Achr5P03490_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
peroxisome 1
golgi 1
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P16990_001	Banana	cytosol	69.77	71.85
GSMUA_Achr4P28860_001	Banana	plastid	66.24	68.44
GSMUA_Achr3P03360_001	Banana	cytosol	68.49	64.55
TraesCS1A01G194900.1	Wheat	cytosol	58.52	58.9
TraesCS1B01G209700.1	Wheat	cytosol	57.88	58.63
Zm00001d051557_P001	Maize	plastid	38.26	58.62
TraesCS1D01G198500.1	Wheat	cytosol	57.88	58.44
VIT_02s0012g01570.t01	Wine grape	extracellular	53.7	57.39
KRH39555	Soybean	cytosol	54.98	57.19
KRH74401	Soybean	cytosol	54.66	56.86
Zm00001d030090_P001	Maize	cytosol, plastid	58.2	55.35
EER94430	Sorghum	cytosol	58.52	54.98
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	38.59	54.79
Solyc08g076790.2.1	Tomato	cytosol	54.98	54.29
VIT_16s0039g01670.t01	Wine grape	cytosol	54.34	54.17
PGSC0003DMT400019823	Potato	cytosol, plastid	54.02	53.5
Solyc06g061280.2.1	Tomato	cytosol, plastid	53.38	53.38
Os10t0576900-01	Rice	cytosol	54.34	52.98
KRH45421	Soybean	cytosol	49.84	52.19
Solyc03g097170.2.1	Tomato	cytosol	51.45	48.78
PGSC0003DMT400008172	Potato	cytosol	51.13	46.36
CDX72244	Canola	cytosol	40.19	41.25
Bra024073.1-P	Field mustard	cytosol	40.19	41.25
AT2G23910.1	Thale cress	cytosol	40.19	41.12
AT4G30470.1	Thale cress	cytosol	39.87	40.92
CDY65186	Canola	cytosol	39.23	40.26
CDY39681	Canola	cytosol	39.23	40.26
Bra032137.1-P	Field mustard	cytosol	39.23	40.26
CDY39207	Canola	cytosol, extracellular, nucleus	15.76	37.98
GSMUA_Achr6P23260_001	Banana	cytosol	35.37	30.3
GSMUA_Achr5P09070_001	Banana	cytosol, mitochondrion	34.73	29.83
PGSC0003DMT400045216	Potato	plastid	52.73	29.23
GSMUA_Achr9P07010_001	Banana	cytosol	28.94	21.9
GSMUA_Achr6P27330_001	Banana	cytosol	22.51	20.83

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491
GO:GO:0016616	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G03490_001	EnsemblPlants:GSMUA_Achr5P03490_001	EnsemblPlants:GSMUA_Achr5T03490_001	UniProt:M0SVC8
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	SUPFAM:SSF51735	UniParc:UPI0002968DD8
SEG:seg	:	:	:	:	:

Description

Putative Dihydroflavonol-4-reductase [Source:GMGC_GENE;Acc:GSMUA_Achr5G03490_001]

Coordinates

chr5:-:2391569..2393638

Molecular Weight (calculated)

34734.4 Da

IEP (calculated)

5.874

GRAVY (calculated)

-0.230

Length

311 amino acids

Sequence
(BLAST)

001: MAPAFVHRDP KTVCVMDASC RLGASLVEAL LRRGYTVHAT AYASSHGKLN DLRRLQSGEN TQQLRCFRAD PFDYQSLVDA MKGCWGLFYV FEPPHDQPYD
101: ECMVEVEVRA AHNVLEACAQ TETMERVVFT SSVTAVIWKE ERRSTATVDE RDWSEPNFCR GFKLWHALGK TLAEKTAWAL AMDRGVEMIS VNAALPTGPQ
201: LSVTNPYLKG AAEMYEDGVL VTVDVQLLVD AHVAVYESPS AYGRYICFGD AVCRPQDAVK LARMLSPNSS CAPPPSDELR VIEQRIQNKK LSKLMVSFYA
301: GRHVEENDPS M

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.