Factsheet for Solyc08g076790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g061280.2.1	Tomato	cytosol, plastid	68.57	69.45
VIT_02s0012g01570.t01	Wine grape	extracellular	62.54	67.7
KRH39555	Soybean	cytosol	61.9	65.22
KRH74401	Soybean	cytosol	60.32	63.55
KRH45421	Soybean	cytosol	56.51	59.93
GSMUA_Achr4P28860_001	Banana	plastid	55.87	58.47
Solyc03g097170.2.1	Tomato	cytosol	59.37	57.01
GSMUA_Achr5P03490_001	Banana	plastid	54.29	54.98
GSMUA_Achr4P16990_001	Banana	cytosol	52.7	54.97
TraesCS1D01G198500.1	Wheat	cytosol	50.16	51.3
TraesCS1B01G209700.1	Wheat	cytosol	49.84	51.14
TraesCS1A01G194900.1	Wheat	cytosol	50.16	51.13
Zm00001d051557_P001	Maize	plastid	32.38	50.25
Os10t0576900-01	Rice	cytosol	50.79	50.16
GSMUA_Achr3P03360_001	Banana	cytosol	52.38	50.0
EER94430	Sorghum	cytosol	51.75	49.24
Zm00001d030090_P001	Maize	cytosol, plastid	49.84	48.01
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	33.33	47.95
AT2G23910.1	Thale cress	cytosol	43.49	45.07
CDX72244	Canola	cytosol	42.86	44.55
Bra024073.1-P	Field mustard	cytosol	42.86	44.55
PGSC0003DMT400045216	Potato	plastid	77.78	43.67
CDY39681	Canola	cytosol	41.59	43.23
Bra032137.1-P	Field mustard	cytosol	41.59	43.23
AT4G30470.1	Thale cress	cytosol	41.59	43.23
CDY65186	Canola	cytosol	41.59	43.23
CDY39207	Canola	cytosol, extracellular, nucleus	15.56	37.98
Solyc02g089770.2.1	Tomato	cytosol	34.29	31.49
Solyc02g086770.2.1	Tomato	cytosol	30.79	26.94
Solyc08g005120.2.1	Tomato	plastid	3.49	4.6

Protein Annotations

EnsemblPlants:Solyc08g076790.2.1	EnsemblPlantsGene:Solyc08g076790.2	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000276C0AD	UniProt:K4CN39	MapMan:35.1	:

Description

No Description!

Coordinates

chr8:+:60704895..60707948

Molecular Weight (calculated)

35437.4 Da

IEP (calculated)

5.217

GRAVY (calculated)

-0.205

Length

315 amino acids

Sequence
(BLAST)

001: MNSTICVMDA SSCLGSKLVK CLLQRGYTVH AALQNYGESS LFLDELECDD DGDDKMKKLK IFRSDPFDYH SIVDALKGCC ALFYSFEPPR DHSTYDEYIG
101: EVEVRAAHNV VEACAQTDTI EKVVFTSSAT AIIWGHHEND QNSASMLLDE RHWSDINVCR KFKLWHALSK TLAEKTAWAL AMDRGVNMVS VNAGLLMGPD
201: LTIKNPYLKG AAEMYEDGVF VTVDLDFLVE AHICVYEQIS TYGRYLCFNH IINQTEDALK LANMLSPMPS SPQSMESDTR IIQERISNKK LNKLMIECQP
301: QINGKSRGVL MKMST

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.