CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030090_P001	Maize	cytosol, plastid	84.29	85.32
Zm00001d051557_P001	Maize	plastid	48.34	78.82
TraesCS1B01G209700.1	Wheat	cytosol	69.79	75.24
TraesCS1D01G198500.1	Wheat	cytosol	69.79	75.0
TraesCS1A01G194900.1	Wheat	cytosol	69.79	74.76
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	46.53	70.32
Os10t0576900-01	Rice	cytosol	67.37	69.91
GSMUA_Achr4P16990_001	Banana	cytosol	57.1	62.58
GSMUA_Achr4P28860_001	Banana	plastid	56.5	62.13
GSMUA_Achr5P03490_001	Banana	plastid	54.98	58.52
GSMUA_Achr3P03360_001	Banana	cytosol	55.29	55.45
VIT_02s0012g01570.t01	Wine grape	extracellular	48.34	54.98
KRH39555	Soybean	cytosol	48.04	53.18
KRH74401	Soybean	cytosol	46.83	51.84
Solyc08g076790.2.1	Tomato	cytosol	49.24	51.75
KRH45421	Soybean	cytosol	45.92	51.18
PGSC0003DMT400019823	Potato	cytosol, plastid	48.04	50.64
Solyc06g061280.2.1	Tomato	cytosol, plastid	47.13	50.16
VIT_16s0039g01670.t01	Wine grape	cytosol	46.22	49.04
Solyc03g097170.2.1	Tomato	cytosol	45.92	46.34
PGSC0003DMT400008172	Potato	cytosol	46.22	44.61
AT2G23910.1	Thale cress	cytosol	39.27	42.76
CDX72244	Canola	cytosol	38.37	41.91
Bra024073.1-P	Field mustard	cytosol	38.37	41.91
CDY65186	Canola	cytosol	38.07	41.58
CDY39681	Canola	cytosol	38.07	41.58
Bra032137.1-P	Field mustard	cytosol	37.76	41.25
AT4G30470.1	Thale cress	cytosol	37.46	40.92
CDY39207	Canola	cytosol, extracellular, nucleus	13.6	34.88
OQU87211	Sorghum	cytosol	26.59	31.21
PGSC0003DMT400045216	Potato	plastid	46.83	27.63
EES18736	Sorghum	cytosol	30.21	27.25
KXG22093	Sorghum	cytosol	8.16	26.21

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:8055134	UniProt:C5WQQ1	EnsemblPlants:EER94430	ProteinID:EER94430
ProteinID:EER94430.1	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	EnsemblPlantsGene:SORBI_3001G285400	SUPFAM:SSF51735
unigene:Sbi.7946	UniParc:UPI0001A82E47	RefSeq:XP_002467432.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:55870109..55874035

Molecular Weight (calculated)

35228.5 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.081

Length

331 amino acids

Sequence
(BLAST)

001: MCPGSVEAAG AAGKSVCVMD AAGPLGHALV DRLLRRGYTV HAATYAACGD DDEEEEATTA ALLSHLSSSC GGDAYRQRLK LFRADPFDYH AIADAVRGCA
101: GVFCMFNTPD DQAQCDESTV ETEVRAAHNV LEACAQADAM ERVVFTSSAT AVVWSGAGAG THHDHEEAAA ADEKSWSDLA FCRKFKLWHA LAKTLSEKTA
201: WALAMDRGVD MVAINAGLLT GPGLTAAHPY LKGAPDMYDA GVLVTVDVDF LADAHVAAYE SPTAYGRYLC FNNAVCRPED AVKLAQMLSP AAPRSPPPPS
301: DELKVIPQRI QNKKLNKLML EFASGVYGEL D

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.