Factsheet for VIT_02s0012g01570.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
plastid 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39555	Soybean	cytosol	69.76	67.89
KRH74401	Soybean	cytosol	68.04	66.22
KRH45421	Soybean	cytosol	65.98	64.65
PGSC0003DMT400019823	Potato	cytosol, plastid	69.42	64.33
Solyc06g061280.2.1	Tomato	cytosol, plastid	67.7	63.34
Solyc08g076790.2.1	Tomato	cytosol	67.7	62.54
VIT_16s0039g01670.t01	Wine grape	cytosol	66.32	61.86
GSMUA_Achr4P28860_001	Banana	plastid	59.11	57.14
GSMUA_Achr4P16990_001	Banana	cytosol	58.08	55.96
GSMUA_Achr5P03490_001	Banana	plastid	57.39	53.7
TraesCS1B01G209700.1	Wheat	cytosol	54.64	51.79
TraesCS1D01G198500.1	Wheat	cytosol	54.64	51.62
TraesCS1A01G194900.1	Wheat	cytosol	54.64	51.46
GSMUA_Achr3P03360_001	Banana	cytosol	57.39	50.61
Os10t0576900-01	Rice	cytosol	53.95	49.22
Zm00001d051557_P001	Maize	plastid	34.02	48.77
EER94430	Sorghum	cytosol	54.98	48.34
Zm00001d030090_P001	Maize	cytosol, plastid	54.3	48.32
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	35.05	46.58
VIT_11s0037g01030.t01	Wine grape	cytosol	41.24	41.67
PGSC0003DMT400045216	Potato	plastid	61.86	32.09
VIT_14s0083g00320.t01	Wine grape	cytosol	33.68	27.45
VIT_14s0066g01150.t01	Wine grape	cytosol	32.3	26.04

Protein Annotations

EntrezGene:100253987	wikigene:100253987	Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	ProteinID:CBI33869
ProteinID:CBI33869.3	UniProt:D7TTV4	EMBL:FN596247	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016616
GO:GO:0055114	EntrezGene:LOC100253987	wikigene:LOC100253987	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01073	PANTHER:PTHR10366
PANTHER:PTHR10366:SF495	SUPFAM:SSF51735	TIGR:TC53437	UniParc:UPI0001BE449E	ArrayExpress:VIT_02s0012g01570	EnsemblPlantsGene:VIT_02s0012g01570
EnsemblPlants:VIT_02s0012g01570.t01	unigene:Vvi.1544	RefSeq:XP_002278778	RefSeq:XP_002278778.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:7838291..7840467

Molecular Weight (calculated)

32362.7 Da

IEP (calculated)

5.770

GRAVY (calculated)

-0.139

Length

291 amino acids

Sequence
(BLAST)

001: MDASSTLGST LVGSLLLRGY TVHAAVQNHG EIQLLNGLSC DTQKLKIFHS DPFDYQSIMD ALKGCSGLFY TFEPPHDQTS YDELMADVEV RAAHNVIEAC
101: AQTETIEKVV FTSSVTAVVW RDDRKSIPSD LDETHWTDIN FSRKFKLWHA MSKTLAEKSA WALAMDRGVN MVSVNAGLLM APDLTITHPY LKGAAEMYED
201: GVFVTVSVDF LVDAHICVFE DVSSYGRYLC FNHIINNNED ALKLAKTLAP SAPSPPQSCD RDMKMIQQRI SNKKLNKLMV NFAGGPKDRM V

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.