Factsheet for TraesCS1B01G209700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G194900.1	Wheat	cytosol	95.11	94.5
TraesCS1D01G198500.1	Wheat	cytosol	94.79	94.48
EER94430	Sorghum	cytosol	75.24	69.79
Zm00001d030090_P001	Maize	cytosol, plastid	72.96	68.5
Os10t0576900-01	Rice	cytosol	68.73	66.14
Zm00001d051557_P001	Maize	plastid	43.0	65.02
GSMUA_Achr4P28860_001	Banana	plastid	61.24	62.46
GSMUA_Achr4P16990_001	Banana	cytosol	59.28	60.26
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	42.67	59.82
GSMUA_Achr5P03490_001	Banana	plastid	58.63	57.88
VIT_02s0012g01570.t01	Wine grape	extracellular	51.79	54.64
KRH39555	Soybean	cytosol	53.09	54.52
KRH74401	Soybean	cytosol	52.12	53.51
GSMUA_Achr3P03360_001	Banana	cytosol	57.33	53.33
KRH45421	Soybean	cytosol	50.49	52.19
PGSC0003DMT400019823	Potato	cytosol, plastid	52.12	50.96
VIT_16s0039g01670.t01	Wine grape	cytosol	51.14	50.32
Solyc06g061280.2.1	Tomato	cytosol, plastid	50.81	50.16
Solyc08g076790.2.1	Tomato	cytosol	51.14	49.84
Solyc03g097170.2.1	Tomato	cytosol	48.53	45.43
PGSC0003DMT400008172	Potato	cytosol	48.53	43.44
AT2G23910.1	Thale cress	cytosol	40.72	41.12
CDX72244	Canola	cytosol	39.74	40.26
Bra024073.1-P	Field mustard	cytosol	39.74	40.26
AT4G30470.1	Thale cress	cytosol	39.41	39.93
Bra032137.1-P	Field mustard	cytosol	39.41	39.93
CDY65186	Canola	cytosol	39.09	39.6
CDY39681	Canola	cytosol	39.09	39.6
CDY39207	Canola	cytosol, extracellular, nucleus	13.36	31.78
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	32.25	26.61
TraesCS1B01G447900.1	Wheat	cytosol, peroxisome, plastid	32.25	26.47
PGSC0003DMT400045216	Potato	plastid	48.21	26.38

Protein Annotations

EnsemblPlants:TraesCS1B01G209700.1	EnsemblPlantsGene:TraesCS1B01G209700	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF428	PFAM:PF13460	SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:-:380467872..380470361

Molecular Weight (calculated)

33629.1 Da

IEP (calculated)

5.044

GRAVY (calculated)

-0.043

Length

307 amino acids

Sequence
(BLAST)

001: MCPGAPVAAA ASDKSVCVMD ASGPLGHALV HRLLRRGYTV HAATYDHSLD ELLAAAGHDE DRLKLFRADP FDYHTIADAV RGCSGLFCMF NTHEDQAGCD
101: ELMVEVEVRA AQNVLEACAQ TVTMERVVFT SSVTAVVWKD DDHKPVDAFD ERNWSDLNLC RKRKLWHALA KTLSEKTAWA LAMDRGVDMV AINAGLLTGP
201: GLSSAHPCLK GVPEMYEHGV LVTVDADFLA DAHVAAYECP TAFGRYLCFN NVVCRPEDAL QFAQMLTPSA PCYPPSDELK VIPQRIQNKK LNNLMVEFAS
301: AIYGDLD

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.