Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024073.1-P | Field mustard | cytosol | 92.08 | 92.08 |
| CDX72244 | Canola | cytosol | 92.08 | 92.08 |
| AT2G23910.1 | Thale cress | cytosol | 80.53 | 80.26 |
| CDY39207 | Canola | cytosol, extracellular, nucleus | 31.02 | 72.87 |
| VIT_11s0037g01030.t01 | Wine grape | cytosol | 62.38 | 65.62 |
| KRH39555 | Soybean | cytosol | 42.9 | 43.48 |
| KRH74401 | Soybean | cytosol | 42.57 | 43.14 |
| Zm00001d034716_P001 | Maize | cytosol, nucleus, peroxisome | 30.69 | 42.47 |
| Solyc06g061280.2.1 | Tomato | cytosol, plastid | 43.23 | 42.12 |
| PGSC0003DMT400019823 | Potato | cytosol, plastid | 43.56 | 42.04 |
| Zm00001d051557_P001 | Maize | plastid | 28.05 | 41.87 |
| GSMUA_Achr4P28860_001 | Banana | plastid | 41.58 | 41.86 |
| Solyc08g076790.2.1 | Tomato | cytosol | 43.23 | 41.59 |
| GSMUA_Achr4P16990_001 | Banana | cytosol | 40.59 | 40.73 |
| KRH45421 | Soybean | cytosol | 39.6 | 40.4 |
| GSMUA_Achr5P03490_001 | Banana | plastid | 40.92 | 39.87 |
| TraesCS1B01G209700.1 | Wheat | cytosol | 39.93 | 39.41 |
| TraesCS1D01G198500.1 | Wheat | cytosol | 39.6 | 38.96 |
| TraesCS1A01G194900.1 | Wheat | cytosol | 39.6 | 38.84 |
| Solyc03g097170.2.1 | Tomato | cytosol | 40.92 | 37.8 |
| Os10t0576900-01 | Rice | cytosol | 39.6 | 37.62 |
| Zm00001d030090_P001 | Maize | cytosol, plastid | 40.59 | 37.61 |
| EER94430 | Sorghum | cytosol | 40.92 | 37.46 |
| PGSC0003DMT400008172 | Potato | cytosol | 41.58 | 36.73 |
| GSMUA_Achr3P03360_001 | Banana | cytosol | 39.6 | 36.36 |
| AT5G14700.1 | Thale cress | cytosol | 32.01 | 26.36 |
| PGSC0003DMT400045216 | Potato | plastid | 40.92 | 22.1 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:829170 | ProteinID:AEE85768.1 | ArrayExpress:AT4G30470 | EnsemblPlantsGene:AT4G30470 |
| RefSeq:AT4G30470 | TAIR:AT4G30470 | RefSeq:AT4G30470-TAIR-G | EnsemblPlants:AT4G30470.1 | TAIR:AT4G30470.1 | EMBL:AY042886 |
| Unigene:At.23662 | EMBL:BT001179 | ProteinID:CAB79765.1 | ncoils:Coil | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_194776.1 | PFAM:PF13460 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF390 | UniProt:Q9M0B3 |
| SUPFAM:SSF51735 | UniParc:UPI0000048A29 | SEG:seg | : | : | : |
Description
Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B3]
Coordinates
chr4:+:14894073..14896844
Molecular Weight (calculated)
34197.8 Da
IEP (calculated)
4.784
GRAVY (calculated)
-0.191
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHDKSTSCC CVLDASTYVG FWILKKLLSR GYSVHAAIRR NGESEIEEMI REMETTEERL VVYDVDVLDY QSILVSLKTC NVVFCCLDSP EGYDEKEVDL
101: EVRGAINVVE ACGRTESIEK IVFSSSLTAS IWRDNIGTQK DVDEKCWSDQ DFCRSKKLWH ALAKMLSEKA AWALAMDRRL NMVSINPGLV VGPSVAQHNA
201: RPTMSYLKGA AQMYENGVLA YVDVKFLADV HIRAFEDVSA CGRYFCFNQI VNTEEEALKL VESLSPLIPM PPRYENEMHG SEVYEERLRN NKLSKLVEAG
301: SAC
101: EVRGAINVVE ACGRTESIEK IVFSSSLTAS IWRDNIGTQK DVDEKCWSDQ DFCRSKKLWH ALAKMLSEKA AWALAMDRRL NMVSINPGLV VGPSVAQHNA
201: RPTMSYLKGA AQMYENGVLA YVDVKFLADV HIRAFEDVSA CGRYFCFNQI VNTEEEALKL VESLSPLIPM PPRYENEMHG SEVYEERLRN NKLSKLVEAG
301: SAC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.